Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01167 ATGATCTCCCCAAGGCAGGACCCTCTTTTGTCTCACACCCATTTCTCAACCATGCTTAAGCTCCTCAACAAGAACATTCGCCGCCTCCTCCGCCGTCTCCGGTGGCCAATTCGCCGCCGCGCGAAGCCCAAAGTAGTAGTCATCAACAAGCTCGGGAAGAGCGCTCCAAAGACCCAAACCGAGCCAAGCCCGACCCTTTCCGCGACGGTTCATCCGAACGCGCCATTGGGTACTCCTAAACCAATCCGGGTGGCGACGTTCAACGCCGCGCTGTTCTCCATGGCCCCGGCGCTCCCGAAAGCCGCAGGCGAGTTGGGGGAGCAAACCGGCGTCGCCTCGAAGTCGAATTCGCGGCCCAGAAGCATACTGAAGCAGTCGCAATCAGTCAAAAACAGAGTGGAGGAGAACGTTGGTTGCAGACCGAAGATGCGGGTTTCCATAAATTTACCAGACAACGAGATTTCGCTGCTGCGAAGCCGACAGTCGAGCTTCTCGGAACACGACAAGGAGGGGTGGAAGGCGTGTTCGTGGGGGGGAGGTGGGACCCACGTGAGTAACAGAACGGTGGTTGAGGTTCTGAAGGAAGTGGGCGCAGATGTTTTGGGTCTGCAAGATGTGAAGGCTGAGGAAGAGAATGGGATGAAGCCTTTGTCGGATTTGGCTGCGGCGCTGGGAATGAACTACGTCTTCGCTGAAAGCTGGGCACCTGAGTACGGCAACGCTGTCTTGTCCAAATGGCCCATCAAACGCTGCGTCTCTCACCAAATCTTTGATCACACTGATTTCAGGAATGTTCTTAAGGCCACTATCGATGTGCCCCAAGTAGGTGAACTGAACTTCTACTGTACCCATCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATCCAATCTAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTAGATGAATCTGATTACTCCCAAGAAAGGTGGACAGATATTGTGAAGTACTATGAGGAGATGGGAAAGCCAACACCGAAGGTTGAAGTGATGAAATATCTAAAGAGTAAAGACTACACTGATGCTAAGGATTATGCAGGGGAATGCGAGTCAGTTGTCATGATTGCCAAGGGCCAAAGTGTTCAAGGGACATGTAAATACGGAACTAGGGTAGATTACATATTATCATCATCATCATCATCATCAAATTCTCCTTACAAGTTTGTTCCTGATTCTTATTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGACGTGGTGAAGGCAAATGACAGCCCTGAAGAAAATGCGACAAAGAATACGCAACAACCAAGACAGAGAGTTGTAAAAATTACACATTCCACTCCCTCAAAAGGTATCTGGAAAACACACACTTGA 1401 0.4946 MISPRQDPLLSHTHFSTMLKLLNKNIRRLLRRLRWPIRRRAKPKVVVINKLGKSAPKTQTEPSPTLSATVHPNAPLGTPKPIRVATFNAALFSMAPALPKAAGELGEQTGVASKSNSRPRSILKQSQSVKNRVEENVGCRPKMRVSINLPDNEISLLRSRQSSFSEHDKEGWKACSWGGGGTHVSNRTVVEVLKEVGADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRCVSHQIFDHTDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSSSSSNSPYKFVPDSYLVLSSKGTSDHHIVKVDVVKANDSPEENATKNTQQPRQRVVKITHSTPSKGIWKTHT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01167 466 MobiDBLite consensus disorder prediction 51 77 - -
Spst7g01167 466 SUPERFAMILY DNase I-like 82 427 IPR036691 -
Spst7g01167 466 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 80 444 - -
Spst7g01167 466 MobiDBLite consensus disorder prediction 53 72 - -
Spst7g01167 466 FunFam Endonuclease/exonuclease/phosphatase family protein 173 430 - -
Spst7g01167 466 MobiDBLite consensus disorder prediction 109 133 - -
Spst7g01167 466 MobiDBLite consensus disorder prediction 434 466 - -
Spst7g01167 466 MobiDBLite consensus disorder prediction 108 134 - -
Spst7g01167 466 Gene3D Endonuclease/exonuclease/phosphatase 172 430 IPR036691 -
Spst7g01167 466 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01167 Spst-Chr7 35858002 35861119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01167 - - gmx:100801298 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01167 7 35858002 35861119 Spst7g01167 7 35858002 35861119 ECH
Spst1g03247 1 40956487 40959199 Spst7g01167 7 35858002 35861119 PCT