Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01163 ATGGCGAAGTGCGCCAATGCTTCCAATGCGCTCCTTTTGCTTTTCTTCTGTTTTCTACGCATCGAGGCCATTTTAGACCCTGCTGATTTCCTCGCTCTGCAATCCATTCGTAAAGCCCTACAAGACATGCCTGGTTCCGATTTCTTCTCCTCCTGGGATTTCACCGCTGACCCATGCAGCTTCGCCGGCGTTTACTGCGACTCCGACAAGGTCATCGCCCTCAACCTCGGCGATCCCAGGGCGGGCTCCCCCGGCCTCACCGGCCGCCTCGACCCCGCCCTCGGCAAGCTTTCCGCGCTCGCCGAGTTCACCGTCGTCCCCGGAAGAATCTACGGTCCTCTCCCGGAATCCATCTCCGATTTGAAGAACCTCAGATTCCTCGGCGTCAACCGCAACTTCATCTCCGGCGAAATTCCGACCAATCTCGGGGAGTTACGCAGCCTCAGAACCCTCGATCTTAGCTACAACCAACTCACCGGACGCATTCCTCCAACCGTAGGATCGCTACCGGAGCTAACAAACCTGATCCTCTGCCATAACCGCCTCTCCGGTTCTGTCCCACGGTTTGAGTCACACACATTAACGCGTCTCGACCTGAAGCATAACTCTCTCTCCGGTTCGCTTCCTCCGAACTCGCTCCCTCCCTCTCTGCAGTACCTCTCCCTGGCCTGGAACCAGCTCACTGGCCAAATGGACCGCCTTCTGGGCCGCCTCGATCAGCTGAATTATTTGGACCTTAGCCTCAACCGCTTCACAGGCCCAATCCCGGACCGCGTATTTTCCTTCCCGCTCACGAATCTGCAGTTGGAAAGGAACCAGTTCTCGGGCCCAGTCAAGCCCGTTGATCAGGTGTCCATCCCGACCGTTGATCTTAGTTACAACCGGTTGTCCGGTCAGATATCGCCGATGCTGGCGAGCGTGCAGAACCTGTACCTGAACAACAACCAGTTCACGGGTCGGGTACCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTATTTGCAACATAACTATCTGACGGGGATTGAGATAAGCCCAACGGCGGTGATTCCAGAGAGAAGCTCCCTGTGTCTGCAGTATAATTGCATGGTCCCGCCCGTAGAGACGCCCTGCCCCTTGAGGGCTGGTAAGAGGAAAACTAGGCCTACTACGCAATGCAACCAGTTGAAGACCTGA 1191 0.5634 MAKCANASNALLLLFFCFLRIEAILDPADFLALQSIRKALQDMPGSDFFSSWDFTADPCSFAGVYCDSDKVIALNLGDPRAGSPGLTGRLDPALGKLSALAEFTVVPGRIYGPLPESISDLKNLRFLGVNRNFISGEIPTNLGELRSLRTLDLSYNQLTGRIPPTVGSLPELTNLILCHNRLSGSVPRFESHTLTRLDLKHNSLSGSLPPNSLPPSLQYLSLAWNQLTGQMDRLLGRLDQLNYLDLSLNRFTGPIPDRVFSFPLTNLQLERNQFSGPVKPVDQVSIPTVDLSYNRLSGQISPMLASVQNLYLNNNQFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKRKTRPTTQCNQLKT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01163 396 FunFam Nuclear pore complex protein NUP107 27 188 - -
Spst7g01163 396 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Spst7g01163 396 SUPERFAMILY L domain-like 27 369 - -
Spst7g01163 396 Gene3D Ribonuclease Inhibitor 191 372 IPR032675 -
Spst7g01163 396 ProSiteProfiles Leucine-rich repeat profile. 147 169 IPR001611 GO:0005515
Spst7g01163 396 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Spst7g01163 396 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Spst7g01163 396 SMART LRR_typ_2 238 262 IPR003591 -
Spst7g01163 396 SMART LRR_typ_2 145 169 IPR003591 -
Spst7g01163 396 SMART LRR_typ_2 304 327 IPR003591 -
Spst7g01163 396 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 13 394 - -
Spst7g01163 396 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01163 Spst-Chr7 35783917 35785107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01163 24 346 Receptor kinase-like Gene Family AT3G51740 34.444 2.65e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01163 - - gmx:100794756 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01163 7 35783917 35785107 Spst7g01163 7 35783917 35785107 ECH
Spst1g03256 1 41027673 41028848 Spst7g01163 7 35783917 35785107 PCT