Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03256 ATGGACGTCGCTTCCTACTTTCTGCTTTTCACGTGCTTTCTTCAATCGGTTAGAGGAATACTAGACCCCAACGATTTCCTCGCTCTGCAATCCATTCGGAAATCGCTTCACGATGTCCCCGGTTCCAATTTCTTCGCGTCCTGGGACTTCACCGCCGACCCCTGCAACTTCGCCGGCGTCTACTGCAACGACGATAAAGTCGTCGCGCTCAACCTCGGCGACCCCAGGGCCGGTTCGCCCGGTCTCACCGGAAAACTAGACCATTCGATTTCCAAGCTTTCTGCTCTCGCCGACCTCACCGTCGTCCCTGGAAGAATATACGGCCCTCTCCCTCAGTCTCTCTCCCAATTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAACTTCATCTCCGGCGAGATTCCGGTGGGTTTAGGCCAGCTTCGCAATATTAGAACCATCGATCTCAGTTACAACCAGCTGACCGGAACAATTCCTCCGTCCATCGGAACCTTACCGCAACTAACCAACCTTATCCTCGGCCACAACCGCCTCTCCGGTTCGGTTCCCTCGTTCGCCTCGGCTTATTCCCTTACCCGGCTCGAACTGAAGCACAACACGTTCTCCGGTTCCCTCGCACCGTACTCTCTCCCTCCCTCCGTACAGTACCTCTCTCTATCATGGAACAAACTAACTGGCCCCTTGGACCGCCTCTTAACCCGGCTCAACCGACTTAACTACTTAGACCTTAGCTTCAACCAGTTCACAGGCCCGATTCCGGCCCAAATATTCTCATTCCCCCTCTCCAATCTACAAATGGAAAGAAACCAATTCTCCGGCCCGGTCCAACCGGTCAATGAGGTGACCATTCAGACCGTTGATCTCAGCTTCAATAGGTTATCCGGTGAGGTGTCGCCCATGCTAGCGAGCGTGCAGAACCTGTACCTGAACAACAACGGGTTCACGGGTCAGGTTCCGGTCAGCTTCGTGGAACGGTTATTATCGGCGGGCATTCAAATACTGTATCTGCAGCACAATTTTCTGACCGGAATTGCGATAAGCCCGACGGCGGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTATAACTGCATGGTGCCACCGGTTCAGACGGCGTGCCCCTTCAACGCCGGGAAGCGGAAAATCAGGCCACCTCAGCAGTGTAACCGCCGCTAA 1176 0.5468 MDVASYFLLFTCFLQSVRGILDPNDFLALQSIRKSLHDVPGSNFFASWDFTADPCNFAGVYCNDDKVVALNLGDPRAGSPGLTGKLDHSISKLSALADLTVVPGRIYGPLPQSLSQLKNLRFLGVSRNFISGEIPVGLGQLRNIRTIDLSYNQLTGTIPPSIGTLPQLTNLILGHNRLSGSVPSFASAYSLTRLELKHNTFSGSLAPYSLPPSVQYLSLSWNKLTGPLDRLLTRLNRLNYLDLSFNQFTGPIPAQIFSFPLSNLQMERNQFSGPVQPVNEVTIQTVDLSFNRLSGEVSPMLASVQNLYLNNNGFTGQVPVSFVERLLSAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCMVPPVQTACPFNAGKRKIRPPQQCNRR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03256 391 Gene3D Ribonuclease Inhibitor 24 186 IPR032675 -
Spst1g03256 391 Gene3D Ribonuclease Inhibitor 187 373 IPR032675 -
Spst1g03256 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 14 389 - -
Spst1g03256 391 SUPERFAMILY L domain-like 33 365 - -
Spst1g03256 391 FunFam Nuclear pore complex protein NUP107 23 184 - -
Spst1g03256 391 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Spst1g03256 391 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03256 Spst-Chr1 41027673 41028848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03256 25 324 Receptor kinase-like Gene Family AT3G51740 33.923 1.39e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03256 - - gmx:100817314 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03256 1 41027673 41028848 Spst1g03256 1 41027673 41028848 ECH
Spst1g03256 1 41027673 41028848 Spst7g01163 7 35783917 35785107 PCT