Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01155 ATGACCGGAGTGGTCATGGTTACCAAGGGCGGTGGATGCGGCGGCGGTGGGAAGCGGTCGAGAACTGCGCGAACTGCTGAGGAAGAAGAAGAGCAGCAGAACCAGCTCTCCCTCGTGGCGTTTCTCTTGGCGGCCATCAGAAAATCGATGGTTTCGTGCAGGGTGGACCCACCTGACGATGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCAACGAACGTTCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGTTTCCTCGGTCTTCCTTACGAATTCCAAGTTGAGATCCCTGCCAGGGTCCCCAGTGCTAGTGTCAGTGTGTTTGGCGTCTCAGCAGAATCTATGCAGTGTTCTTATGATTCTAAAGGAAACAGCGTCCCCACTATTCTCCTGCTAATGCAGGACCGTCTATACTCACAGGGAGGCTTAAAGGCCGAGGGTATATTTCGCATAAACCCAGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCTGATGACATCGATGTGCACTGCTTGGCGGGACTAATCAAAGCCTGGTTCCGAGAGCTACCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAATGCAACACAGAAGAAGAATGTGTTGAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCTGCCTTACTCAGCTGGGCTATTGATCTCATGGCCGATGTTGTAGAAGACGAGGAACTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTTATCATGAAGACACTTCGAGAACGTGAAGAAACAGCGACAGGTGGCTATTCTCCCATGTCGTCTCATTCATCTGGTCGTCAATCTGAGGATGAATATGACAGTCAGCGAGAAATGGATACAAGTGGTGAATTGAGAGGCACCAAATCAGATTATGATGCTCACTATGGCCACAGCAGTGAAGGGGAGGCTGAATCTTTAAGCGGGATAGAGGAGTGCTTCTTGAAGCAGTTGGATGAGAACAATAAGGGATTCTCACAAGAACCTGCAGGCCATTTGGAGAAGTATGTTAGCACCAGAAGTTACTCTGCCTATAGCATGGAACCTTCTATATCTGTTACTGATAACAAAGCTGGGAAGTCCTGCTTGAGGACAAGTGTAGACACAAGTAGTTCATCAATAGGATGTACAAGCACCAAAGATGTGGAGATGGTGGATAAATTTGCTGAATCTATTTCACCTATGCCACTCCTTGCTTCTAGCTAA 1344 0.4784 MTGVVMVTKGGGCGGGGKRSRTARTAEEEEEQQNQLSLVAFLLAAIRKSMVSCRVDPPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEECVELVKQLKPTESALLSWAIDLMADVVEDEELNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATGGYSPMSSHSSGRQSEDEYDSQREMDTSGELRGTKSDYDAHYGHSSEGEAESLSGIEECFLKQLDENNKGFSQEPAGHLEKYVSTRSYSAYSMEPSISVTDNKAGKSCLRTSVDTSSSSIGCTSTKDVEMVDKFAESISPMPLLASS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01155 447 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Spst7g01155 447 MobiDBLite consensus disorder prediction 296 350 - -
Spst7g01155 447 Gene3D Rho GTPase activation protein 101 296 IPR008936 -
Spst7g01155 447 Gene3D CRIB domain 65 100 IPR036936 -
Spst7g01155 447 PANTHER MKIAA1688 PROTEIN 20 361 IPR044785 GO:0005096
Spst7g01155 447 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Spst7g01155 447 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 -
Spst7g01155 447 CDD RhoGAP 132 288 - -
Spst7g01155 447 MobiDBLite consensus disorder prediction 11 30 - -
Spst7g01155 447 Pfam P21-Rho-binding domain 69 100 IPR000095 -
Spst7g01155 447 FunFam Rho GTPase-activating protein 5 100 293 - -
Spst7g01155 447 ProSiteProfiles CRIB domain profile. 70 83 IPR000095 -
Spst7g01155 447 ProSiteProfiles Rho GTPase-activating proteins domain profile. 115 296 IPR000198 GO:0007165
Spst7g01155 447 SMART PBD_5 70 104 IPR000095 -
Spst7g01155 447 MobiDBLite consensus disorder prediction 313 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01155 Spst-Chr7 35628144 35630776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01155 - - gmx:100801481 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01155 7 35628144 35630776 Spst7g01155 7 35628144 35630776 ECH
Spst1g02597 1 34429736 34432260 Spst7g01155 7 35628144 35630776 PCT