Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02597 ATGACGGGGCAAGTCGTGGTGACCAACGGTGGCGGGTGCGGCGTTGGGAAGGGGCGGAGAGGCACCGAGGAGGAGCAAAATCCGGCGTCGCCTGTGGCGGTTCTGTTGGCGGCGCTGAGGAAATCGATGGTGGCGTGCAGTGTGGACAGTCCCGACGATGTAATCTCCGCCGTCCATCACCCCATGGAGATCGGATGGCCCACAAACGTGAAGCATGTTAGTCATGTCACTTTCGATCGCTTCAATGGGTTTCTGGGTCTTCCGCTTGAGTTGGAGGTTCACGTCCCCGCTCCTGTTCCCAGTGCTAGTGTTAGTGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCCTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTTCTGCTAATGCAAGACCGATTGTACTCACAGGGTGGCCTAAAGGCTGAAGGTATATTTCGCATAAATCCAGAGAACAGTCAAGAGGAGCATTTGAGGGAGCAGTTGAATAAGGGCCTTGTGCCTGATGACATTGATGTCCATTGCTTGGCAGGCCTAATCAAAGCATGGTTCAGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTGAGTGCAACACAGAAGAAGAGTCTGTTCAGCTTGTGAAGCAGCTAAAGTCAACTGAGTCAGCTTTGCTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGCAGAAGAGGATTACAACAAAATGGATGCAAGAAACATTGCAATGGTTTTTGCTCCAAATATGACTCAGGCTCTAGTATTCAAAATTCACATTTTTAACTTTTGTCTCCTGAAACAGATGTCTGATCCGTTAACTGCTCTGATGCATGCGGTCCAAGTGATGAATTTACTGAAGACCCTCATACTGAAGACACTTAGAGAACGTGAAGAAACAGCCGGAGGAGAATATTCGCCCATGTCATCTCGTTCATCTGATCGCCAATCTGAGGATGACTATGATAGTCAGCAAGAAATGGATACCAGTGGCGAATTGAGGGAGACCAAGTCTGAAGACTATGAAGATAATGATAATGATGTTAACTACAGTCCTGCCAGTGAAGAGCATGGGGAGGCTGATGCAGCATCAGTGAGTGAGATAGTGGAATGCTTCTTGAAACGTTTGGATGAGAAAACAAAAAGATTCTCAGAAGAACCTGTAGGGTATTTGCAAGAGAAGTTAGAGAGCCACAAGAGTTGCACTGGCTATAACTTGGAATCTGCTTTATCATTAACTGATATCAAAACTGAGAATTCTTGCTCAAGTTCCTCTTCTGAAGATGACTCAAGAACAACTCTTACTGCGGAGGAATCAAATGCTGACACAGGTAGTTCATCAATGGGAAGCACAAGCAACGATGTGGAGATGATTGATAAATTTACAGATTCTGTTTCACTAGTTCCACTGTTTGCATCTAGCTAA 1449 0.4624 MTGQVVVTNGGGCGVGKGRRGTEEEQNPASPVAVLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHLREQLNKGLVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVQLVKQLKSTESALLNWAIDLMADVVAEEDYNKMDARNIAMVFAPNMTQALVFKIHIFNFCLLKQMSDPLTALMHAVQVMNLLKTLILKTLREREETAGGEYSPMSSRSSDRQSEDDYDSQQEMDTSGELRETKSEDYEDNDNDVNYSPASEEHGEADAASVSEIVECFLKRLDEKTKRFSEEPVGYLQEKLESHKSCTGYNLESALSLTDIKTENSCSSSSSEDDSRTTLTAEESNADTGSSSMGSTSNDVEMIDKFTDSVSLVPLFASS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02597 482 MobiDBLite consensus disorder prediction 424 463 - -
Spst1g02597 482 SMART PBD_5 64 98 IPR000095 -
Spst1g02597 482 PANTHER MKIAA1688 PROTEIN 22 437 IPR044785 GO:0005096
Spst1g02597 482 SMART RhoGAP_3 123 302 IPR000198 GO:0007165
Spst1g02597 482 Gene3D Rho GTPase activation protein 96 301 IPR008936 -
Spst1g02597 482 SUPERFAMILY GTPase activation domain, GAP 105 299 IPR008936 -
Spst1g02597 482 Gene3D CRIB domain 59 95 IPR036936 -
Spst1g02597 482 CDD CRIB 62 92 - -
Spst1g02597 482 MobiDBLite consensus disorder prediction 321 362 - -
Spst1g02597 482 ProSiteProfiles Rho GTPase-activating proteins domain profile. 109 305 IPR000198 GO:0007165
Spst1g02597 482 ProSiteProfiles CRIB domain profile. 64 77 IPR000095 -
Spst1g02597 482 Pfam RhoGAP domain 126 260 IPR000198 GO:0007165
Spst1g02597 482 CDD RhoGAP 126 258 - -
Spst1g02597 482 MobiDBLite consensus disorder prediction 308 370 - -
Spst1g02597 482 Pfam P21-Rho-binding domain 63 91 IPR000095 -
Spst1g02597 482 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02597 Spst-Chr1 34429736 34432260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02597 - K20642 gmx:100812700 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02597 1 34429736 34432260 Spst1g02597 1 34429736 34432260 ECH
Spst1g02597 1 34429736 34432260 Spst7g01155 7 35628144 35630776 PCT