Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01021 ATGGGCATACTCTACGACGATGTAGTGATCATAAGTCAGCCACAAAAGGACGGCGACCCAACTGTTCTCACTGTCAACTGCCCTGATAAAACCGGTCTGGGCTGCGATTTGTGCAGAATCATACTCTTCTTTGGTCTCAACATACTCAGAGGAGATGTTTCAACGGATGGGAAATGGTGCTACATAGTTTTCTGGGTGCTTGGGAAACAGAGGACGAGGTGGAGTTTGTTGAAGAAGCGGCTGATTGAAGCATGCCCTTCTTGCTCCTCGGCTTCTGGAATATCTTATTATCGATCTGAGTTGCAGCCGTCCAAGCCTCCTGATGTATTTCTTTTGAATTTTTGCTGTCATGATCGGAAAGGGCTTTTGCATGATGTTACTGAGGTTCTTTGTGAGCTAGAACTTACCATCAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTAATGGATTTGTTTTTCATCACAGATACCAGAGAACTTTTACATACAAAGAAGAGAAAGGACGAAACAATTGAACATCTAACAGAGATTTTAAGGGATGCCATCATTTCTATTGACATAGAATTGGTTGGCCCAGAAATTACAGCTTGTATCCAGGCATCTCCATTCCTTCCAACTGCAATCACAGAAGATGCCTTTGATTTGGAATTGCCTGATTTGGCTCGTAGCGGAACTCTCAGATCAGATTATGTTTCTATCATGATGGACAACACACTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAAGACCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAAGACTATAATATTCAGATTTCTTATGGGCGTTTCACTACAAAACCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATTGTTGACCCGAACAAGCAGAATTCCTTGTCATCACGCCTTAGAATGGAACTACTCCGTCCACTCAGAGTAACCATTGTCAGTAGGGGCCCCGATACCGAGCTTCTGGTCGCAAATCCAGTGGAGTTATCCGGCAAGGGCCGGCCTCTTGTTTTTCATGATATCACTCTTGCACTCAAAATGCTCGGCACTTGCATCTTTTCGGCTAAAGTTGGAAGACACTTAATTGGAGATCGTGAGTGGGAGGTTTATAGAGTCCTGCTTGATGAAGGGGAGGGGTTATCTGTTCCAAGGAACAAAATTGAGGAGGGAGTTTGGAAAATGCTGATGGGTTGGGAGTAA 1239 0.4358 MGILYDDVVIISQPQKDGDPTVLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVLGKQRTRWSLLKKRLIEACPSCSSASGISYYRSELQPSKPPDVFLLNFCCHDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDETIEHLTEILRDAIISIDIELVGPEITACIQASPFLPTAITEDAFDLELPDLARSGTLRSDYVSIMMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELLRPLRVTIVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLGTCIFSAKVGRHLIGDREWEVYRVLLDEGEGLSVPRNKIEEGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01021 412 Pfam ACT domain 111 167 IPR002912 -
Spst7g01021 412 Gene3D - 108 192 - -
Spst7g01021 412 SUPERFAMILY ACT-like 19 81 IPR045865 -
Spst7g01021 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Spst7g01021 412 SUPERFAMILY ACT-like 244 295 IPR045865 -
Spst7g01021 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Spst7g01021 412 SUPERFAMILY ACT-like 107 180 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01021 Spst-Chr7 18182685 18186114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01021 - - gmx:100816138 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01021 7 18182685 18186114 Spst7g01021 7 18182685 18186114 ECH
Spst1g02862 1 37215856 37218583 Spst7g01021 7 18182685 18186114 PCT