Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01017 ATGTTCAAGAAGATCATGAAAGGTGGGCACAAGAAGCCCTCCAAGTCCGAGGCAAGCGATCCCTTGCCTGCGCCGTACGTCGCTGCCAACCGCAACTCGCCGGCGGCGCCCTCGGCCAATGTCATGGTGAACCACGCCTCGCGCGGAGTCGGAGGCGGCGCGCCTCCTAGCTCTGGCACCGCGATGCCGCTCGTGCCGACCCCCGGGTCTATGGAGCCTGTGCCGCCGTTCCGCGACGCGCCAGTATCGGAGCGTCAGAACCTCTTCCTCCGGAAGCTCCACATGTGCTGCTACGTCCTCGACTTTTCTGACACGATGAAGAATGTTAGAGAGAAGGAAATCAAGCGCCAAGCGCTGATGGACCTCGTCGAGTTCATCCAATCCGGCTCCAGCAAGATGTCGGAGCATTGCCAGGAGGAGATGATCAGAATGATCTCCGTCAACATTTTCCGGTGCCTCCCACCAGCGTCGCACGAGAACACAGGCCAAGAACCCACGGATCCTGAAGAAGAGGAACCAAGCTTGGATCCGACGTGGCCTCACCTTCAGCTCGTGTACGAGCTTCTCCTTAGATACGTGGTTTCCGCCGAAACCGATACGAAAATTGCTAAACGGTATATTGACCACTCCTTTGTTCTCAAATTGCTTGATTTGTTTGACTCTGAAGACCCGCGGGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGGCCGTTTATTAGAAAGGCTATTAACAACATTTTTTATCGGTTCATATATGAGACTGAGCGGCACTCTGGTATTGGGGAGCTTCTGGAGATTCTTGGGAGCATTATTAATGGGTTTGCACTGCCCATGAAAGAGGAGCATAAGTTGTTTCTGGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCGGTGTCCATGTACCACCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCGGATACGGTGATTAGGGGGTTGTTGAAGTATTGGCCTCTCACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTGGAGGAAGTGCTGGAGGCCACGCAGGCCGCCGAATTTCAAAAATGCATGGTTCCACTTTTTAGACAGATTTCACGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAACCCTCTTTTTGTGGAACAATGAACATGTTGTGAGCTTAATTGCCCAAAACAGGACTGTGATACTACCAATAATATTTGATGCTTTTGAGAAGAACATCTCGAGTCATTGGAATCAGGCAGTACATGGACTGACCGTGAATGTTCGCAAAATGTTCATGGAAATGGATACAGAATTGTTTGAAGAGTGCGAGCGACAGCACGCAGAGAATGAGAGTAAGGCCAAAGATGTAGCAGAGCTGCGGGAACTTAATTGGAAAAGACTGGCAGATGCGGCTGCACAGAACGGAGTGGAGGACATGGTCACAACTTAG 1491 0.5084 MFKKIMKGGHKKPSKSEASDPLPAPYVAANRNSPAAPSANVMVNHASRGVGGGAPPSSGTAMPLVPTPGSMEPVPPFRDAPVSERQNLFLRKLHMCCYVLDFSDTMKNVREKEIKRQALMDLVEFIQSGSSKMSEHCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPTWPHLQLVYELLLRYVVSAETDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVSMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEATQAAEFQKCMVPLFRQISRCLNSSHFQVAERTLFLWNNEHVVSLIAQNRTVILPIIFDAFEKNISSHWNQAVHGLTVNVRKMFMEMDTELFEECERQHAENESKAKDVAELRELNWKRLADAAAQNGVEDMVTT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01017 496 Gene3D - 81 484 IPR011989 -
Spst7g01017 496 MobiDBLite consensus disorder prediction 156 175 - -
Spst7g01017 496 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 81 484 - -
Spst7g01017 496 PIRSF PP2A_B56 9 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst7g01017 496 MobiDBLite consensus disorder prediction 1 38 - -
Spst7g01017 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 75 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst7g01017 496 SUPERFAMILY ARM repeat 86 467 IPR016024 -
Spst7g01017 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01017 Spst-Chr7 18026829 18032784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01017 K11584 - gmx:100795277 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01017 7 18026829 18032784 Spst7g01017 7 18026829 18032784 ECH
Spst1g02857 1 37158596 37163043 Spst7g01017 7 18026829 18032784 PCT