Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02857 ATGTTCAAGCGAATAATGAAGGGAGGGCAGAAGAAGCCCTCCAAGACGGACCCGAGCGATCCGACACCCGTCGGTCCGATGCCCACGGTCGCCGCTCCAGAGGTGGTCGTGCCACCGCCGCCGGGGACCATAGAGCCGCTACCGCTGTTCCGCGACGTGGCGGTGACGGAGCGGCAGAACCTCTTCATCCGGAAGCTCCAGATATGCTGCCACGTGCTAGACTTCTCGGACACGCTGAAGTGCATTCGCGAGAAGGAAATCAAGAGGCAGACGCTGATGGAGCTCGTGGATTTCATTCAATCGGGTTCGGGGAAGATAACGGAGACGTGCCAGGAGGAGATGATCAAAATGGTTTCGGCCAACATTTTTCGGTGCCTCCCGCCGGCCGGGCACGAAAACACCGGGCAGGAAGCCACCGATCCGGAGGAGGAGGAGCCGTGCCTCGAGCCCGCGTGGCCGCACCTTCAGCTCGTCTACGAGCTTCTCCTGAGATACGTCGTTTCCTCTGATACTGACACAAAGGTTGCGAAACGGTACATTGATCATTCTTTTGTCCTCAAACTGCTTGATTTGTTTGGCTCTGAGGACCCACGTGAGCGTGAGTACTTAAAAACCATACTGCATCGCGTGTACGGGAAATTCATGGTTCATCGCCCCTTTATTAGGAAGGCAATTAACAACATATTTTTTCGGTTTATATATGAGACGGAGCGGCATAGTGGTATAGGGGAGCTTCTTGAGATTCTGGGGAGCATTATTAATGGCTTTGCACTGCCGATGAAGGAAGAACATAAGTTGTTTCTATCGAGGGCGCTTCTGCCTCTGCATAAGCCCAAGCCGGTTGGTGTGTATCACCAGCAGTTGTCGTATTGCATTGCGCAGTTTGTGGAGAAGGATTACAAGCTCGCAGATACAGTCATTAGGGGCTTGTTGAAGTATTGGCCTGTGACTAATTGCCAGAAGGAGGTTCTCTTCCTTGGGGAACTTGAGGAGGTGCTGGAGGCCACGCAAGCGGCGGAATTCCAACGCTGCATGGTCCCTCTTTTTAGACAGGTTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAACTCTCTTTTTGTGGAACAATGAGCACATTGTCAGCTTAATTGCCCAAAACAGGACTGTAGTATTACCCATAATATTTGAAGCATTGGAGAAAAATGTCCAGAGTCATTGGAACCAGGCTGTTCACGGGCTGACCGTGAATGTTCAGAAAATGTTCCTAGAAATGGATGCAGATTTATTTGAAGAGTGCCAGAGACAGTATGCAGAGAGGGAGGCTAAAGCAAAAGATTTAGAAGAGCAGCGGGAGTTGAATTGGAAAAGACTGGCAGAGGCAGCTGCACAGAATGGGGTGGATATGGTCACAGCTTAG 1407 0.5139 MFKRIMKGGQKKPSKTDPSDPTPVGPMPTVAAPEVVVPPPPGTIEPLPLFRDVAVTERQNLFIRKLQICCHVLDFSDTLKCIREKEIKRQTLMELVDFIQSGSGKITETCQEEMIKMVSANIFRCLPPAGHENTGQEATDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFGSEDPREREYLKTILHRVYGKFMVHRPFIRKAINNIFFRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLSRALLPLHKPKPVGVYHQQLSYCIAQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQVARCLNSSHFQVAERTLFLWNNEHIVSLIAQNRTVVLPIIFEALEKNVQSHWNQAVHGLTVNVQKMFLEMDADLFEECQRQYAEREAKAKDLEEQRELNWKRLAEAAAQNGVDMVTA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02857 468 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 37 462 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst1g02857 468 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 54 457 - -
Spst1g02857 468 PIRSF PP2A_B56 38 466 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst1g02857 468 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 47 458 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst1g02857 468 MobiDBLite consensus disorder prediction 19 34 - -
Spst1g02857 468 Gene3D - 55 457 IPR011989 -
Spst1g02857 468 MobiDBLite consensus disorder prediction 1 34 - -
Spst1g02857 468 SUPERFAMILY ARM repeat 59 440 IPR016024 -
Spst1g02857 468 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02857 Spst-Chr1 37158596 37163043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02857 K11584 - gmx:100798308 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02857 1 37158596 37163043 Spst1g02857 1 37158596 37163043 ECH
Spst1g02857 1 37158596 37163043 Spst7g01017 7 18026829 18032784 PCT