Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00968 ATGCGGTGCTGCATTCACACGCTGTTGGTCGTGACCGCCATGCTGGTGTCGGCGGTGCACGGCGCTTTCCTCCCTCTGCAACGGAGTATTCCTCTGAGCCACCGCGAGGAGGTGGCGGTGCTGAGGGCTCGCGACAGTGCCCGCCATGCCAGAATGTTGAGCGGCATAGTCGACTTCGCCGTGCAAGGAACCTCCGATCCAAATTCCGTTGGGTACGGGTTGTATTATACCAAAGTGAAGATGGGAACACCTCCTAAAGAATTTAACGTTCAGATTGATACCGGGAGTGATATATTGTGGGTGAATTGCAATACTTGCAGTAATTGTCCTCAGTCGAGTGAACTAGGGATTGAGCTTAACTTCTTTGACACGGTTGGGTCGTCTACGGCTGCGTTGGTTCCCTGCTCGGACCCGATATGCACTATTGGGGTTCAAGGTGCTGCTGCTGAGTGCTCCACGAGGGTTAATCAATGCAGCTACAGCTTTAAGTATGGAGATGGGAGTGGGACTTCAGGTTATTATGTTTCGGATGCATTGTATTTTAACTTGATCATTGGACAGCCTTCACTTCCATCGGTTAACTCTTCGGCTACCATTATTTTTGGGTGTAGCATCAGTCAGTCTGGAGATCTGACTAAGACAGATAAAGCAGTTGATGGGATTTTTGGGTTTGGCCCTGGTGCTCTATCTGTTGTATCACAATTGTCATCACGAGGAATAACACCCAAAATTTTCTCTCATTGCTTAAAAGGAGATGGTGATGGAGGAGGCATTCTAGTCCTTGGCGAGATAAAGGAGTCAAGTATGGTTTATAGTCCACTTGTTCCATCGCAGCCTCATTATAACTTGAATCTTCAGAGTATTGCTGTCAATGGGCAACTCCTCCCAATTAATTCAGCTGTATTTGGAACATCCAATGACCGAGGAACTATAGTTGACTGTGGTACAACATTGGCGTATCTTGTTCAAGAAGCTTATGATCCTCTTGTCAATGCGATAACTACTGTTGTGTCACAATCTGCACGGCAAACTAATTCCAAAGGAAACCAGTGTTATCTGGTCTCAAACAGTATAGGTGACATTTTTCCTTCGGTCAGTTTAAACTTTGAGGGGGGAGCGTCAATGATTTTAAAACCAGAGCAATACCTTCTGCATAATGGTTACCATGATGGTGCTGAAATGTGGTGCATCGGTTTCCAAAATGTACAAGAGGGGGTCTCAATTCTAGGAGATCTTGTCCTAAAAGATAAGATAGTTGTGTATGACTTGGCTCATCAACGAATTGGATGGACTAACTATGACTGTTCTTCGTCTGTAAATGTTTCGGTGACTACGAGCAAGGATGAATACATCAATGGGGGACAGCTAAGTCTCAGCAGCTCCGCAAAACGCCTTCTTTCTAATTTACTACTTGTAAGCATTGTGGCTCTCTCTATGTACATAATGTTGGTATGA 1455 0.4543 MRCCIHTLLVVTAMLVSAVHGAFLPLQRSIPLSHREEVAVLRARDSARHARMLSGIVDFAVQGTSDPNSVGYGLYYTKVKMGTPPKEFNVQIDTGSDILWVNCNTCSNCPQSSELGIELNFFDTVGSSTAALVPCSDPICTIGVQGAAAECSTRVNQCSYSFKYGDGSGTSGYYVSDALYFNLIIGQPSLPSVNSSATIIFGCSISQSGDLTKTDKAVDGIFGFGPGALSVVSQLSSRGITPKIFSHCLKGDGDGGGILVLGEIKESSMVYSPLVPSQPHYNLNLQSIAVNGQLLPINSAVFGTSNDRGTIVDCGTTLAYLVQEAYDPLVNAITTVVSQSARQTNSKGNQCYLVSNSIGDIFPSVSLNFEGGASMILKPEQYLLHNGYHDGAEMWCIGFQNVQEGVSILGDLVLKDKIVVYDLAHQRIGWTNYDCSSSVNVSVTTSKDEYINGGQLSLSSSAKRLLSNLLLVSIVALSMYIMLV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00968 484 Pfam Xylanase inhibitor N-terminal 75 262 IPR032861 -
Spst7g00968 484 Pfam Xylanase inhibitor C-terminal 280 431 IPR032799 -
Spst7g00968 484 SUPERFAMILY Acid proteases 70 439 IPR021109 -
Spst7g00968 484 CDD pepsin_A_like_plant 75 435 IPR034161 -
Spst7g00968 484 PRINTS Pepsin (A1) aspartic protease family signature 81 101 IPR001461 GO:0004190|GO:0006508
Spst7g00968 484 PRINTS Pepsin (A1) aspartic protease family signature 407 422 IPR001461 GO:0004190|GO:0006508
Spst7g00968 484 PRINTS Pepsin (A1) aspartic protease family signature 310 321 IPR001461 GO:0004190|GO:0006508
Spst7g00968 484 ProSiteProfiles Peptidase family A1 domain profile. 75 431 IPR033121 -
Spst7g00968 484 FunFam Aspartic proteinase-like protein 2 56 263 - -
Spst7g00968 484 Gene3D Acid Proteases 57 263 IPR021109 -
Spst7g00968 484 Gene3D Acid Proteases 264 442 IPR021109 -
Spst7g00968 484 FunFam Aspartic proteinase-like protein 2 264 442 - -
Spst7g00968 484 PANTHER ASPARTYL PROTEASES 8 429 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00968 Spst-Chr7 16438547 16443073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00968 68 437 Miscellaneous Gene Families AT1G44130 27.296 4.07e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00968 - - gmx:100820394 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00968 7 16438547 16443073 Spst7g00968 7 16438547 16443073 ECH
Spst1g02819 1 36730399 36735667 Spst7g00968 7 16438547 16443073 PCT