Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00964 ATGGTGCCGTACAAGGTCTCTTGGAGTGGTCAAAAAGTTACATACAACAAAGTTATGCAACTTTTTTTAAACCATTGGCACTTGACAAGGATCAAATTCAGATTTTGTTGGCATAGTTTTTCAGTTCAAACCAAATTTTCTTTCTTCTTGATGGGACTCACAGCACTCAAGGCAGAGAACTTGAAGCCGGTTATCCTCAAAGCTGGTGTTCCCTTGGCTGCATCTTTGGCTGGTTTGATCTATGCATGGATCGTTGCAAAGAAAAACTTGTCTACTAAACTTTTTTCTTCTCCTGAAAATGGGTGTGATTCTCCAAAAATCACTTGTCATCATGAGAGTTTTGACGACAACCTTTGTTATGTGGAAGATGGAGAATCATCTACTCCTATGAATAGTAGTGTTCTCTCTGGGAGCTTGGTGATCCATGACAACAACTCATGTTTGGAACATGAGATCACTGGCCTGAGAAGCCAGATTGAAGGTCTTCAGATGAGGGAATTGGGCTTGCGTTTGCAGTTTGAGTTGTACTGTGAAATGAAGGCACAAGAATCTCTACTTGTTGAAGTCAAAAACATGTTGTCGATGGAGAATGATCGTGCTGAGTTCTTGAGCAAAGAGATTTCTTCCATAGAGACTGAGACTATGAAGTTGGAGGGTTTTGTAATCCAATACATGAGTGTAATTGAACAGCTTCAGTATTGGAAATCGCAGAATAGGGTGCTTCAAAGGAGGGTTCAAAGGCTACTTAGAGATTCAAAGGCCAAATCTCGTTTGATAAAGGGGCAGGCTTTGAAGATCAAAGAGAAAGAAGAAGAACTATCGAGAAACCATGAGGCCCTGCAAACAAGGGTATGCGTCATTAATAAGTTAGAGAGTGAAATCAGAGAGCTAGAAAGGATATTGGACCAATTGGAAGGTGAGAAGAATGAGGTTGTGAAGAAGCTTGAAACAGCAGAAGCAGAAGCATCTAAGTTGTACAAGGAAAAGATATATAGAAAGCCATTGAAATATTATTTGGAGACTGAATCAGGAGATGTGAGCAAGGAAGACTACAACAGGGTTGTCAATGAATTGGAAGAGGTCAAGAAGGAACGGTCAACTGAAGTTGAAGAGCTGATTCATCTGAGGAGGGTCAATACTTGTTTAAGGCAAGAGTTGATGAGGCACTGTGAAGAACATCAGGAGCAACACAGAGACCATGTAGAGGGGGAATTCGAAGGAGGCTTAGGATTTGTGCAGTATGATTCAGAGCATGAGTTGCATCATTCCCTTTTGGAGCATCACAATGATTCTGCTCATGGTGATAATGCTTCTTCAAAAAGGAGAAGGTTGCTTAAGAGGCTGAAGAGGTGGGTTGAAGGAAGTGAAAAGGTAAGAGTGAAGCCTGAAATTATCAAAGAAACTTCCGTTTCCTATGGTTCAAAGGAACCTCAAGTTTCTTCAAATTCAAGGTTCTGCTCTAGTGCTTGA 1470 0.4095 MVPYKVSWSGQKVTYNKVMQLFLNHWHLTRIKFRFCWHSFSVQTKFSFFLMGLTALKAENLKPVILKAGVPLAASLAGLIYAWIVAKKNLSTKLFSSPENGCDSPKITCHHESFDDNLCYVEDGESSTPMNSSVLSGSLVIHDNNSCLEHEITGLRSQIEGLQMRELGLRLQFELYCEMKAQESLLVEVKNMLSMENDRAEFLSKEISSIETETMKLEGFVIQYMSVIEQLQYWKSQNRVLQRRVQRLLRDSKAKSRLIKGQALKIKEKEEELSRNHEALQTRVCVINKLESEIRELERILDQLEGEKNEVVKKLETAEAEASKLYKEKIYRKPLKYYLETESGDVSKEDYNRVVNELEEVKKERSTEVEELIHLRRVNTCLRQELMRHCEEHQEQHRDHVEGEFEGGLGFVQYDSEHELHHSLLEHHNDSAHGDNASSKRRRLLKRLKRWVEGSEKVRVKPEIIKETSVSYGSKEPQVSSNSRFCSSA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00964 489 Coils Coil 145 165 - -
Spst7g00964 489 MobiDBLite consensus disorder prediction 469 489 - -
Spst7g00964 489 Coils Coil 348 371 - -
Spst7g00964 489 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 59 455 IPR040265 -
Spst7g00964 489 Coils Coil 263 283 - -
Spst7g00964 489 MobiDBLite consensus disorder prediction 471 489 - -
Spst7g00964 489 Coils Coil 287 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00964 Spst-Chr7 16362842 16364311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00964 - - vum:124842227 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00964 7 16362842 16364311 Spst7g00964 7 16362842 16364311 ECH
Spst1g02813 1 36668219 36669860 Spst7g00964 7 16362842 16364311 PCT