Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02813 ATGGAAAACACGACATCAAAGCATGAGATCCTAAAGCCAGTGATCATCAAAGCTGGTGTTCCTTTGGCTGTGTCTTTTGCTGGTTTAGTCTATGCTTGGTTTGTGGCAAAGAAAAGCCTCTCTAAAATCTCTTCTTCATCACCAAAGGAATCAAGTTCCGATGAAACCAATTCCCACCACGAGCTTTCATATGAAGAAAGTTGTCATAGTCATAGCCTCTCTAGTATGGAAGATGACGGAAATAGTACAACTATGGATGACAGTGTTGTTGCTGAAAGTTCCGTGATTCATGACACCCCATGTTTAGAAGAAGAGATTAATGGCTTAAGAAGCAGGATTGAGGGTATGCAAATGAAAGAGTTGGGCTTCCGTTTGCAGTTTGAACGTTATTGTGGTTTAAAAGAGCAAGAAACCGTGGTTGGGGAGATAAAAAACATGTTGTTTCTTGAGACTGCTCGTGTTGACTTCTTGGATAGGGAGATTTCATCGATGGAGACACAGAGAAGGAGGTTGGAGGGTTTTGCTGCTCAGTATCTTAGAGTTGTGGAACAGACAGAGCGTTGGAAATCTGAGAATAGAATACTTCGGAGAAAATTTCAGAAGCTAATGAGGAAATCAAAGGCACAAACCCGCGTCTGCAAGGAGCAAGCGTTGAAGAACAAATTGGATGAAGAAGAAATATTGAGAAGCCGTGATGCCTTGGAAACAAAAGTTGATGTCATAGGTAAACTAGAGGCTAAAATGGAAGAGCTGCAGAGGGCTTTGGATCAATTGCAGGATGAGAAGAATGAACTTCTTAGGAAGCTTGACACAGCAGAAAAATCCTATGCTTCAAAGTTGCAGATTGAAGCTGGAGATGTAAGTAGGGAAGACTACAAACAGCTTGTGGATGAATTGGAGCAGATGAAGAAGGAACGAGCAGATGAAGCTAAAGAACTGATTTACTTGCGGTGGACCAACGCTTGTTTAAGGCATGATCTAATGAGGCCCCATGAACAACAAGCGGATCAAGATAAAAGGCATGTAGAATTGGAATTTGGAAGAAATGATGTAGTTATCCATTATGACTCAGAGCATGAACTACAGAATTCCCTTTATAGCGATCCTTCATTTGATGAGCATCCTGGTGGCCATGACCACAGTGACAGTGCTTGTTCAAAAAGGAGAAAGTTTCTTGAGAGGCTGAAGAGATGGGTGGAAGGCTGTGAAAAGGCTAGAGTCAGGCACTCTGTTTCCAAAGGAACAGATGAACATGTAGTTCCTAGAAGGAAATCATGCTCTAGTGCTTCTTGA 1293 0.42 MENTTSKHEILKPVIIKAGVPLAVSFAGLVYAWFVAKKSLSKISSSSPKESSSDETNSHHELSYEESCHSHSLSSMEDDGNSTTMDDSVVAESSVIHDTPCLEEEINGLRSRIEGMQMKELGFRLQFERYCGLKEQETVVGEIKNMLFLETARVDFLDREISSMETQRRRLEGFAAQYLRVVEQTERWKSENRILRRKFQKLMRKSKAQTRVCKEQALKNKLDEEEILRSRDALETKVDVIGKLEAKMEELQRALDQLQDEKNELLRKLDTAEKSYASKLQIEAGDVSREDYKQLVDELEQMKKERADEAKELIYLRWTNACLRHDLMRPHEQQADQDKRHVELEFGRNDVVIHYDSEHELQNSLYSDPSFDEHPGGHDHSDSACSKRRKFLERLKRWVEGCEKARVRHSVSKGTDEHVVPRRKSCSSAS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02813 430 Coils Coil 234 275 - -
Spst1g02813 430 MobiDBLite consensus disorder prediction 365 385 - -
Spst1g02813 430 MobiDBLite consensus disorder prediction 409 430 - -
Spst1g02813 430 Coils Coil 285 312 - -
Spst1g02813 430 MobiDBLite consensus disorder prediction 44 87 - -
Spst1g02813 430 MobiDBLite consensus disorder prediction 409 423 - -
Spst1g02813 430 MobiDBLite consensus disorder prediction 53 73 - -
Spst1g02813 430 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 12 405 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02813 Spst-Chr1 36668219 36669860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02813 - - gmx:100805210 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02813 1 36668219 36669860 Spst1g02813 1 36668219 36669860 ECH
Spst1g02813 1 36668219 36669860 Spst7g00964 7 16362842 16364311 PCT