Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00960 ATGGCGTCGGGGCAACACGAGGAACGAGCTGAGGCAGCTTCGAAAATTGCTGCCAAAGAACTTGAACAAGCCAACAGAGAGAGAGACCGAGATGCCGCAGCTGGGAAACTTGCTGCCAAAGAACATGAGCAAGCCAACAGAGAGAGAGACCGAGATGCCGCAGCTGGGAAACTTGCTGCCAAAGAACATGAGCAAGCCAACAGAGAGAGAGACCGAGATGCCGCAGCTGGGAAACTTGCTGCCAAAGAACTTGAGCAAGCCAACAGAGAGAGAGACCGTGATGATGTGGGTGTCGTGGACAAGCAACACGATCAAGAAAAACGTGGTGTGATCGGGTCCATGTTGAGGGCGGTGCAAGAAGCAGTGGTGGGAAAGAAAGAATCACCTCCTGCGAACCCCTACACCAAAGAGGTGATTCATGATGTTACTATCCAACCTGATAAGGTGCCAACAGGGGAAGTGAGAGACATATCAGCCACCAAATCTCCAGGGGTCTACGATTCTCCTGCCACAGACAAAACTGGTTCCAAGGCTGGTGAATATGCAGCTTATGCTTCTGAGAAGGCCAAGGAAACTAAGGATGCAACAATGGATAAAGCTGGTGAGTATGCTGATTATGCTTCTCAGAAGGCCAAGGAAACTAAGGATACAACAATGGATAAAGCTGGTGAATACGCCGACTATGCTTCTCAAAAGGCAAAGGAAACTAAGGATGCAACAATGGAAAAAGCTGGTGAATACGCCGACTATGCTTCTCAGAAGGCCAAGGAAGCGAAGGACAAGACTATGGAGAAGGGTGGGGAGTATAAGGACTATGCCGCTGAGAAGGCTAAGGAAGGAAAAGATGCTACGGTGAATAAGATGGGAGAGTATAAGGACTACACTGCAGAGAAGACGAAAGAAGGGAAAGATAGTGCTATGGGGAAGCTTGGGGAGCTGAAGGATTCTGCTGCGGATGCTGCTAAGAGGGCTGTGGAGTACTTGAGCGGCAAGAAGGAGGAAACCAAGGAGAAGGCCTCAGAAACCGCGGAGGCAGCTAAGAACAAGGCTGCGGAGACAGCAGAGACGGCGAAGAATAGGGCGGCGGAGATGAAGGATGCAGCGAAGGAGAAGGCCGCTGAAACTGCGGAAGCAACGAAGAACAAGACTGCTGAGACGGCTGAGGCAGCTAAGAATAAGGGTAGGGAGATGAAGGAGAAGGCTGCAGAAACTGCGGATGCAACAAAGAACAAGACTGCCGAGACGGCTGAGGCAGCTAAGAATAAGGGTAGGGAGATGAAGGAGAAGGCTGCAGAAACTGCGGATGCAACAAAGAACAAGACCTCGGAGGCAACTGATGTGGCCAAGCATAAGGCTGCGGAGATGAAGGACAAGGCTGCAGATGCCACAGAGGCGGCAAAACAGAGAACTGCACAGGCAAGGGAGAAAACCAAGGAGGATTTGAGTGGTGCAGATGAAGCTGCAAGGAGGAAAATGGAGAACCTAAGGCTACAAGACAAAGGGTTCAAAGATATACCTGAGGGGCGTGGAGAAAAAGTGGTGATGAAAGTGGAAGAGAGTCGACCGGGGGCAATGGCGGATACACTGAAAACGGCGGATCAGATTGCGGGACAGACCTTCAACGATGTGGGACCCTTGGGCGAAGAGGGGGTCAAGGTGGTAAAAAAGAAATAA 1674 0.509 MASGQHEERAEAASKIAAKELEQANRERDRDAAAGKLAAKEHEQANRERDRDAAAGKLAAKEHEQANRERDRDAAAGKLAAKELEQANRERDRDDVGVVDKQHDQEKRGVIGSMLRAVQEAVVGKKESPPANPYTKEVIHDVTIQPDKVPTGEVRDISATKSPGVYDSPATDKTGSKAGEYAAYASEKAKETKDATMDKAGEYADYASQKAKETKDTTMDKAGEYADYASQKAKETKDATMEKAGEYADYASQKAKEAKDKTMEKGGEYKDYAAEKAKEGKDATVNKMGEYKDYTAEKTKEGKDSAMGKLGELKDSAADAAKRAVEYLSGKKEETKEKASETAEAAKNKAAETAETAKNRAAEMKDAAKEKAAETAEATKNKTAETAEAAKNKGREMKEKAAETADATKNKTAETAEAAKNKGREMKEKAAETADATKNKTSEATDVAKHKAAEMKDKAADATEAAKQRTAQAREKTKEDLSGADEAARRKMENLRLQDKGFKDIPEGRGEKVVMKVEESRPGAMADTLKTADQIAGQTFNDVGPLGEEGVKVVKKK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00960 557 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 170 233 - -
Spst7g00960 557 Coils Coil 478 498 - -
Spst7g00960 557 Gene3D - 294 345 - -
Spst7g00960 557 Gene3D - 201 249 - -
Spst7g00960 557 Gene3D - 393 445 - -
Spst7g00960 557 Gene3D - 250 293 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 327 505 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 327 345 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 1 110 - -
Spst7g00960 557 Pfam Late embryogenesis abundant protein 204 247 IPR004238 -
Spst7g00960 557 Pfam Late embryogenesis abundant protein 248 291 IPR004238 -
Spst7g00960 557 Pfam Late embryogenesis abundant protein 292 323 IPR004238 -
Spst7g00960 557 Pfam Late embryogenesis abundant protein 276 313 IPR004238 -
Spst7g00960 557 Pfam Late embryogenesis abundant protein 170 203 IPR004238 -
Spst7g00960 557 Coils Coil 336 393 - -
Spst7g00960 557 Coils Coil 7 27 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 1 176 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 384 407 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 413 436 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 351 378 - -
Spst7g00960 557 MobiDBLite consensus disorder prediction 442 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00960 Spst-Chr7 16160642 16162468 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00960 - - vun:114189667 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02808 1 36641858 36642891 Spst7g00960 7 16160642 16162468 PCT