Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02808 ATGGCGTCGGGACAGCAATTCAAGGGTGACAGAGCCGAGGCAGCAGCGAAACTCGCTGCCAAAGACATCGGCGATATCAACAGAGCGAACGAGCGTGATGCGAGCTACGACTTGCACCCCGAGGTCAACTTCAAGCAAGCACGAGCCGAAGCAGCGGCGAAGCTCGCCGCAAAGGATCTGGAGGATGTTAACAGAATGAGGGACAACACTGTGACCACATTGAAAGAGCAACAACATTACGACGATAATAGACCCGGCGTGATAGGGTCCATGTTCAGAGCCGCTAAGGAAGCGGTGGTTGGGAAGCCTCACGATGTAGTTGAGACCTCGCCAAGGGTTTATGATTCCACCACCAGAGAGAAGGTAAGGGAGACGAAGGAGCAAGGTGGATCCAAGATGGGGGAATATGCAGATTATGCGACTCAGAAGGCGAAGGAAACGAAGGATGCAACGATGCAGAAGACTGGGGAGTACACAGACTATGCGACTCAGAAAGCGAAAGAAAGCAAGGACTATGCTGCGGAAAAGGCTAAGCAAGCTAAAGATGCTACAGTGCAGAAAGCTGGTGAGTACAAGGATTATACTGCTGAAAAGGCAAAGGAAGGGAAGGACACAGCAGCGGGGAAGCTTGGAGAGCTGAAGGACTCTGCTGCAGATGCTGCTAAAAGAGCTATGGGTTTCTTCACGGGCACGAGAGACGAAACAAAGGTGAGTGGAACGCCTGAGGATGCTAGGCGGAGAATGGAAGAGGTGAGGGTGCAGGATAAGGAGTATGGAACGGGGCATGGTGGAGAGAAGTTGGTGATCAAACTTGAAGAGTCGCGGCCAGGAGCGGTGGCGGATGCGATGAAAGCGGCGGAGAGGGCCTTGGGCGGCGAGATGGAGGAAGAAGGAATCCTTCATGTGGAGCGTCGTAGAGAGAAGATGTGA 930 0.5323 MASGQQFKGDRAEAAAKLAAKDIGDINRANERDASYDLHPEVNFKQARAEAAAKLAAKDLEDVNRMRDNTVTTLKEQQHYDDNRPGVIGSMFRAAKEAVVGKPHDVVETSPRVYDSTTREKVRETKEQGGSKMGEYADYATQKAKETKDATMQKTGEYTDYATQKAKESKDYAAEKAKQAKDATVQKAGEYKDYTAEKAKEGKDTAAGKLGELKDSAADAAKRAMGFFTGTRDETKVSGTPEDARRRMEEVRVQDKEYGTGHGGEKLVIKLEESRPGAVADAMKAAERALGGEMEEEGILHVERRREKM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02808 309 MobiDBLite consensus disorder prediction 231 265 - -
Spst1g02808 309 Gene3D - 166 229 - -
Spst1g02808 309 MobiDBLite consensus disorder prediction 114 131 - -
Spst1g02808 309 MobiDBLite consensus disorder prediction 236 265 - -
Spst1g02808 309 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 13 291 - -
Spst1g02808 309 MobiDBLite consensus disorder prediction 102 137 - -
Spst1g02808 309 Pfam Late embryogenesis abundant protein 118 154 IPR004238 -
Spst1g02808 309 Pfam Late embryogenesis abundant protein 137 178 IPR004238 -
Spst1g02808 309 Pfam Late embryogenesis abundant protein 170 213 IPR004238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02808 Spst-Chr1 36641858 36642891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02808 - - pvu:PHAVU_001G184600g 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02808 1 36641858 36642891 Spst7g00960 7 16160642 16162468 PCT