Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00748 ATGAAACGCATGGATATCTTCTGTGCTTCCCAAGCCTCAACAGCCATATGTCTCAGCATGGATCAAGCCTCATGCTCCTCTTCAAACACCATTCTACTCGGAGGCCGAGCTATTGACCGCCACAACCCCATTATCAATGACTCAAGAAGGAGCACTTCCAAATCTCTCACTGCCCCTTGTTCCTCCTCTCAGTCACCCATCAACCCAAAGCCTTACCATGAGCTCCGCAAGGCCAAGAAAAACTCTACTGCCAAAAATGCAACCAAGGGTCATGATAATCACAAGAAGAAAAACACAGCAGAAAACATCGCTGAACATGTCACCTACACTTCTAAACCAATTGATGGCATTGTGCGTAGGAGTTTGATTAAGCCACCTTCTGATTTAATCACTCCTCATGGCTCAGCTAGATCTTTGCTCAGTGACTCGGTCTTATTGGATGCTTCATCACATTATGATCCAGTTTTGGCCTTATCTACTACGGTTAATAGCAAAACTTCTCAAGTTGTTCTTCAAGATGAAACCATCCCTGTTTCTAAACATTCCAGCTCTTCTCATTCAAAATCTGGTTCCGAAGACCAGGTTGTTGAATTGAGGGTATCTCTGCATTGCAAAGGCTGTGAAGGGAAAGTGAGGAAACACCTTTCCAGAATGCAAGGAGTTACTTCCTTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTGGTTGGGGATGTGACTCCATTGAGTGTCTTGGCTAGCATATCAAAGGTGAAAAATGCACAATTCTGGCCAGCAAGTGCATCAGCAGGAGGATCTGGTACTGTTGAAACAAAGAAAATAAATTTATCCAATTAA 837 0.4361 MKRMDIFCASQASTAICLSMDQASCSSSNTILLGGRAIDRHNPIINDSRRSTSKSLTAPCSSSQSPINPKPYHELRKAKKNSTAKNATKGHDNHKKKNTAENIAEHVTYTSKPIDGIVRRSLIKPPSDLITPHGSARSLLSDSVLLDASSHYDPVLALSTTVNSKTSQVVLQDETIPVSKHSSSSHSKSGSEDQVVELRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPASASAGGSGTVETKKINLSN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00748 278 CDD HMA 197 250 IPR006121 GO:0046872
Spst7g00748 278 MobiDBLite consensus disorder prediction 72 101 - -
Spst7g00748 278 Pfam Heavy-metal-associated domain 198 250 IPR006121 GO:0046872
Spst7g00748 278 ProSiteProfiles Heavy-metal-associated domain profile. 193 259 IPR006121 GO:0046872
Spst7g00748 278 MobiDBLite consensus disorder prediction 42 101 - -
Spst7g00748 278 Gene3D - 191 255 - -
Spst7g00748 278 PANTHER OS08G0405700 PROTEIN 4 264 IPR044526 -
Spst7g00748 278 MobiDBLite consensus disorder prediction 48 69 - -
Spst7g00748 278 SUPERFAMILY HMA, heavy metal-associated domain 194 251 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00748 Spst-Chr7 7731607 7732875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00748 - - gmx:100813295 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00748 7 7731607 7732875 Spst7g00748 7 7731607 7732875 ECH
Spst1g02979 1 38328679 38332575 Spst7g00748 7 7731607 7732875 PCT