Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02979 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATCAGCCATCTTCCTCCTCTTCTTCAATTTCCAACACTACTCAATTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACCCCCTCCAGAGACTTCATTGTCCCCAGTTCTCCTTCTAAGTCCCACATCGATCCCAAACCTTTGCATGATCTCCCAAAGGCCAAGAAAAACTCCAGTTCCAAGCCCAGTGGCCAGAAAAAGAAAAATGCAGCAAAGGGTCTTGATCAGAAGAAGAAAAGTAGTGCAGGAAAGTTAACTGAACACTTCACCAACAATTACTCTTCAAAACCAATAGATAGTATTCTGAGGAGGAGTTGGGTTAGGCCACCTACTGATTTAATCACTCCTCCTGGTTCTTCAAGATATTTGCTCGGTGACACTCCTTCCTTTGATGCTGGATCATCGGTTTATGATCCTGTTTTGGCTTTAACTAACGTTGATAAGGAGAAAGGTCAAGTTCTTCATCATGATGAAACCAGCCATTCATCTAAACCCTCTAGCTCCTCTCTTCCAAAATCGGGTTCCTCAGACCAGGTTGTAGTTTTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTGAGGAAACATCTCTCCAGAATGCGAGGAGTTACATCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTGGTTGGTGATGTGACTCCTTTGAGTGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTCTGGCCAGAGCCTGCTTCAGTGGCTGAATCCGAGAAGTACGCAGAAGATGGATATGACAAAAAGAAACACGCGCTTATGATAGAAAAACAAGGAAAATGTTACACGGCGTAG 912 0.4452 MKGIDIFCASQASTAICLSMDQPSSSSSSISNTTQFGGRAIDRHNPIITDPRRTPSRDFIVPSSPSKSHIDPKPLHDLPKAKKNSSSKPSGQKKKNAAKGLDQKKKSSAGKLTEHFTNNYSSKPIDSILRRSWVRPPTDLITPPGSSRYLLGDTPSFDAGSSVYDPVLALTNVDKEKGQVLHHDETSHSSKPSSSSLPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEPASVAESEKYAEDGYDKKKHALMIEKQGKCYTA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02979 303 MobiDBLite consensus disorder prediction 95 111 - -
Spst1g02979 303 PANTHER OS08G0405700 PROTEIN 6 277 IPR044526 -
Spst1g02979 303 Pfam Heavy-metal-associated domain 209 261 IPR006121 GO:0046872
Spst1g02979 303 CDD HMA 208 261 IPR006121 GO:0046872
Spst1g02979 303 Gene3D - 203 266 - -
Spst1g02979 303 ProSiteProfiles Heavy-metal-associated domain profile. 204 270 IPR006121 GO:0046872
Spst1g02979 303 MobiDBLite consensus disorder prediction 20 121 - -
Spst1g02979 303 MobiDBLite consensus disorder prediction 20 39 - -
Spst1g02979 303 MobiDBLite consensus disorder prediction 177 203 - -
Spst1g02979 303 SUPERFAMILY HMA, heavy metal-associated domain 205 262 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02979 Spst-Chr1 38328679 38332575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02979 - - gmx:100810015 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02979 1 38328679 38332575 Spst7g00748 7 7731607 7732875 PCT