Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00746 ATGGACTCTCTCCCTGTAAATCACCACCCTCACATCTCACTCGCTCACTCCCAGCGACAAAGGAGTCTTAATTTCTTCCCTCGCTCTTCATTTCCAACGCCCTTCTCTTCCGTCTCTCCCATCAGAGCCTCATCTTCACCCAAACACAACCCATTTCACAAACCCCAAACCCCCTTATCCCAACTTCTCAAAACCCTATACCCTCTTCTCTCCACTCTCGTCAAACCCACCTCCGTCGCCATAGCCGCCACCGCATTCTTCTTCATGCGCCTCCACCCTCCCTCCCTCGCCGCCGAGGATCCACCTTCACCTTCGCTGCCGTCCACCGCGGCCGAAATTCTCTCCGATGAGAGTGCCGCGACGGAAACTCTCCCCCATGCAAGCACCGCGTCGGAAACTCTCCCCGACGAGAGCGCCGCAGAAGAGCAACCGAGCGACGAGGTCGTCGAGCTTGAGTCCCTCCTGCAGACCAAAATGCGAGCCCGCGAAATAGACGAAGCGATCCTCGTCCTGAACCGTCTAATCGAACTCGAACCGGGGGAACTCGAGTACCCGTTCTTAAAGGCGAACCTGCACATGCGCTTAGGCGAGCATGAACTCGCCGCGAAGGGGTTCGAGGACTTGCTTGAGAGGGATCCGTTCCACGTGGAGACGCATCGATGCCTGTTAATGGTAATTTCGGAGACGAAGGCGTCGACAAGGGAACTTCTGAAGAAGATCGAAGAGACGGTGAAGGTTTGCGAGGAGGAAGAAAGAGATTCCGATGTGAGAGACTTCAAGTTGTTGATCGCGCAGATTAAGGTTATCGATGGGGATTTATCTGATGCGTTGAAGGTGTATGAGGAGCTTGTGAAGGAAGAACCCAAGGATTTTAGACCTTACTTGTGTCAGGGTATTGTGTATACTATGCTGAAAAAGAGTGATGAAGCTGAGAAGCAATTTCAGAAGTATCGCACGCTTGTTCCCGAGAATCATCCTTATAAGCAGTATTTTGAGGACAATTCTAAGATTTTGGAGACGGGACGACTAGGTGAAAAGAGCTTAGGGTAA 1050 0.5219 MDSLPVNHHPHISLAHSQRQRSLNFFPRSSFPTPFSSVSPIRASSSPKHNPFHKPQTPLSQLLKTLYPLLSTLVKPTSVAIAATAFFFMRLHPPSLAAEDPPSPSLPSTAAEILSDESAATETLPHASTASETLPDESAAEEQPSDEVVELESLLQTKMRAREIDEAILVLNRLIELEPGELEYPFLKANLHMRLGEHELAAKGFEDLLERDPFHVETHRCLLMVISETKASTRELLKKIEETVKVCEEEERDSDVRDFKLLIAQIKVIDGDLSDALKVYEELVKEEPKDFRPYLCQGIVYTMLKKSDEAEKQFQKYRTLVPENHPYKQYFEDNSKILETGRLGEKSLG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00746 349 Gene3D Tetratricopeptide repeat domain 119 346 IPR011990 GO:0005515
Spst7g00746 349 PANTHER TRANSMEMBRANE PROTEIN 224 326 - -
Spst7g00746 349 MobiDBLite consensus disorder prediction 118 138 - -
Spst7g00746 349 SMART tpr_5 257 290 IPR019734 GO:0005515
Spst7g00746 349 SMART tpr_5 291 324 IPR019734 GO:0005515
Spst7g00746 349 SMART tpr_5 182 215 IPR019734 GO:0005515
Spst7g00746 349 MobiDBLite consensus disorder prediction 37 56 - -
Spst7g00746 349 Coils Coil 230 250 - -
Spst7g00746 349 SUPERFAMILY TPR-like 159 325 IPR011990 GO:0005515
Spst7g00746 349 MobiDBLite consensus disorder prediction 118 147 - -
Spst7g00746 349 Pfam Tetratricopeptide repeat 271 323 - -
Spst7g00746 349 Pfam Tetratricopeptide repeat 158 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00746 Spst-Chr7 7686409 7687458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00746 - - vra:106770360 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00746 7 7686409 7687458 Spst7g00746 7 7686409 7687458 ECH
Spst1g02982 1 38345751 38346824 Spst7g00746 7 7686409 7687458 PCT