Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00710 ATGGAGGAAGCGCTTGAGCTCGCACGCGCCAAGGACGCCAAGGAGAGGATGGCCGGCGTGGAGCGCCTCCACGAGGTTCTCGAAGCTTCTAGAAGAAACCTCAGTTCCGCCGAAGTCACCTCGCTCGTTGACTGCTGCCTGGATCTCTTGAAGGACAGCAGCTTCAAGGTCTCGCAGGGCGCGCTTCAGGCGCTCGACTCTGCCGCCGTCCGCGCCGGCGACCACTTCAAGCTCCACTTCAACGCGCTCGTTCCCGCCGTTGTTGAACGGTTTGGCGATGCCAAACAGCCTGTCCGCGACGCTGCCAGACGCCTCTTGCTTACTCTCATGGAGGTTTCATCTCCCACTATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACAAGCAAAAGCTGGAGAGTTAGAGAGGAATTTGTGCGAACTGTCACATCTGCTATTGGTCTATTTTCATCTACTGAGCTTCCTCTTCAACGTGCTATTCTTCCTCCGATTCTGCAGTTGCTTAATGATTTGAATCTTGCTGTAAGGGAAGCAGCTATTTTGTGCGTTGAGGAGATGTATACACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGCCATAATCTTCCTTCATCTATGGTGAAAGCTATTAATGCCAGACTAGAAGGAATTCAACCAAAAGTTCAGTCTTCAGATGGTATTTCTAGTGGTTATATTGCTGGGGAAATTAAGCCTGTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAGTCTAAAAGCTCATCAAGAGAGACCTCTCTTTTTGGAGGAGAAGGTGACGTTACAGAGAAGGTCATAGACCCCATCAAGGTGTATTCAGAGAAGGAGTTAATCAGAGAAATTGATAAGATTGCTGCTACCCTTGTACCGGAAAAGGACTGGTCAATTCGAATTGCTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTACTGATTATCCATGTTTCTTTGGACTCCTGAAGCAGCTTGTTGGGCCTTTAAGTGCACAATTGTCAGATCGAAGGAAGGATGTTAAGATGCCATATCAGCTGGGTTGCCATCTATTATGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGCATGTGCTGAATTGTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACCGTGCTTGTAATTGCAGAATCTGCTGATACCTGCATAAAAACGATGTTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGAATAGCTGATTGTGCAAAAAATGATCGTAGTGCTGTCCTTCGTGCAAGGTGTTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCAGCAGAAATACAACGATCAGCTGATTTATACGAGGATATGATAAGGAGCTGTGTTTCAGATGCAATGAGCGAGGTGCGGTCAACTGCAAGGATGTGTTACAGAATGTTTGCAAAGACTTGGCCAGAACGCTGTCGCCGCCTGTTTTCTTCCTTTGACCCTGCTATTCAAAGGTTAATAAATGAAGAGGATGGAGGTATACATAGGAGACATGCATCACCTTCTGTTCGTGATAGAGGTGCATTGATGTCAATAACTGGTCAAGCTTCAGCTCCCTCTAATCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGACAGAAGTTCAAGTTTATCATCAGGGACTTCTATTGCCTCTGGCGATTTTTCACAAGCAAAGTCACTTGGAAAAGGTACTGAACGTAGTTTGGAAAGTGTGCTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTCTGATAAGCATGGTTCATCGGTTCTCCGATCATCAAGTTTGGATCTAGTAATTGATGATGTTAGGGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCTGCTGTCTCAGCATCTAATCATCTGACTAGCTCTTCAATGACAGAGTCAGCTGCTTCTGGTGCGAATAAAGGTAGTAACCGCAATTGTGGTTTGGGTTTGTCTGACATAATCACTCAAATTCAGGCTTCCAAAGATCCTGGCAGGTTACCATATAATACTAATGTTAGTATTGAGCCATTATCAGCATATTCATCATACTCGAGTAAAAGAGCTACTGAGAAATTACAAGAGAGAAGTTCTGTGGATGAAAACAATGACATCAGGGACAGTAGACGATATATGAATGCCAACATAGATAGGCAGTATATGGATACCCATTATAGAGATGGCAACTTTAGGGATTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTGTTGAGAAAGAATGTGACTGGGCGTGTGTCTGCTAGTAGTAGGAGGAGTTTGGATGATAGTCAATTATCTCTTCGAGATATGTCAAGTTATGCGGATGGACCATCATCTCTTCATGAAGCTCTGAGTGAAGGATTAAGCTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCACTCTTTGTTGCAGCAAGGTCAAAGGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCCCATCATAAGGTTGCACAAGCTGCTCTCTCCACACTTGCAGAGATTATTTTGGCATGCCGAAAGCCCTTCGAAGGTTACATGGAAAGAATGTTACCTCATGTTTTTTCTCGGTTAATTGATCCCAAAGAGCTAGTTAAGCAAGCCTGCTCAATGAATTTGGAAGTTGTTAGCAAAACGTACAGCATAGATTCTCTCTTACCTGCTTTGCTACGATCACTTGATGAACAAAGGTCTCCAAAGGCAAAATTGGCTGTTATTGAGTTTGCTATAAGCTCCTTTAACAAGCATTCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTTCTAAGTTAGTTCCATTGGTTCATGATAAAAATACAAAACTTAAAGAAGCATCTATCACGTGCATTATATCAGTTTACTCTCACTTTGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGACGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGATTTAATGAATTATCTGCAGAACAAGAAAGAGCGACGTTCTAAGTCTTCCTATGATCCATGTGATGTCGTGGGAGCATCCCCTGAAGAGGGATATACTGGTTTGTCCAGGAAAGCTCATTACATTGGAAGGTATTCAGCTGGTTCAGTGGATAGTGATGGTGGCAGGAAGTGGAATTCCCAAGATTCCACCCTGATTAAAGGCAATATTGGCCAAGCAGCTTCTGATGAATCTGAGGAACATACTGATTCTAATACTGGTATTTTTGGTTTAAAAACTAAAGATCATGCTTACACAGTCAATTCATTCAGTCAAAACTTTGGCTTTCAAACTAGCCAAGTAGGACATTTGAACAGTAACATGAATTTTGAAGGTCTATCATCTGATCTTGATGTTAATGGTCTGATGTCATCAGAACATTTAAATATTGCTGAAGACTTTGGACTTGAAAAAGAACATCCCTCTGAACTGAACCATAATCATCAGTCGGTTGAAGGTGTAAAAGTAAACTACATGACTGACACTGGTCCCAGTATTCCTCAGATTCTTCATATGGTATGCAGTGGGGGCGATGGAAGCCCTATTTCAAGTAAGCGGACTGCACTTCAACAGCTAGTTGAAGTGTCTATAGCTAATGATCATTCCGTTTGGACTCTGTACTTCAATCAGATTTTGACAGTTGTGCTTGAAGTGCTGGATGATTCAGACTCCTTAATCAGAGAGCTTGCTCTGTCTCTGATAGTTGAAATGCTTAAAAGCCAGAAAGATGCTATGGAAACTTCAGTTGAGATTATTGTTGAAAAGCTGCTTAATGTTACAAAGGATATTGTTCCCAAGGTCTCAAACGAAGCAGAGCACTGCCTTACCATTGTTTTATCTCAGAATGATCCGTTTAGATGTCTAAGTGTTATTGTTCCTCTACTGGTTACTGAGGATGAGAAAACTCTTGTCACTTGCATAAATTGCTTGACAAAGCTTGTGGGGCGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCCTCTTTTCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGAATCTATCTATAGGTGATCAAAAGCCATAG 4209 0.4281 MEEALELARAKDAKERMAGVERLHEVLEASRRNLSSAEVTSLVDCCLDLLKDSSFKVSQGALQALDSAAVRAGDHFKLHFNALVPAVVERFGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTSKSWRVREEFVRTVTSAIGLFSSTELPLQRAILPPILQLLNDLNLAVREAAILCVEEMYTQAGSQFRDELQRHNLPSSMVKAINARLEGIQPKVQSSDGISSGYIAGEIKPVGVNPKKSSPKSKSSSRETSLFGGEGDVTEKVIDPIKVYSEKELIREIDKIAATLVPEKDWSIRIAAMQRIEGLVLGGATDYPCFFGLLKQLVGPLSAQLSDRRKDVKMPYQLGCHLLCFLSKDLLGDFEACAELFIPVLLKLVVITVLVIAESADTCIKTMLRNCKVARVLPRIADCAKNDRSAVLRARCCDYALLILEHWPDAAEIQRSADLYEDMIRSCVSDAMSEVRSTARMCYRMFAKTWPERCRRLFSSFDPAIQRLINEEDGGIHRRHASPSVRDRGALMSITGQASAPSNLTGYGTSAIVAMDRSSSLSSGTSIASGDFSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHGSSVLRSSSLDLVIDDVRGVDPPSSRDPPFPAAVSASNHLTSSSMTESAASGANKGSNRNCGLGLSDIITQIQASKDPGRLPYNTNVSIEPLSAYSSYSSKRATEKLQERSSVDENNDIRDSRRYMNANIDRQYMDTHYRDGNFRDSQNSYVPNFQRPLLRKNVTGRVSASSRRSLDDSQLSLRDMSSYADGPSSLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGQRGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLAEIILACRKPFEGYMERMLPHVFSRLIDPKELVKQACSMNLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHSMNPEGAANIGILKLWLSKLVPLVHDKNTKLKEASITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRSKSSYDPCDVVGASPEEGYTGLSRKAHYIGRYSAGSVDSDGGRKWNSQDSTLIKGNIGQAASDESEEHTDSNTGIFGLKTKDHAYTVNSFSQNFGFQTSQVGHLNSNMNFEGLSSDLDVNGLMSSEHLNIAEDFGLEKEHPSELNHNHQSVEGVKVNYMTDTGPSIPQILHMVCSGGDGSPISSKRTALQQLVEVSIANDHSVWTLYFNQILTVVLEVLDDSDSLIRELALSLIVEMLKSQKDAMETSVEIIVEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKNLSIGDQKP 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00710 1402 MobiDBLite consensus disorder prediction 626 663 - -
Spst7g00710 1402 Gene3D - 1 222 IPR011989 -
Spst7g00710 1402 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Spst7g00710 1402 SMART TOG_3 792 1037 IPR034085 -
Spst7g00710 1402 SMART TOG_3 3 224 IPR034085 -
Spst7g00710 1402 SMART TOG_3 282 517 IPR034085 -
Spst7g00710 1402 Gene3D - 805 1029 IPR011989 -
Spst7g00710 1402 Gene3D - 1219 1397 IPR011989 -
Spst7g00710 1402 MobiDBLite consensus disorder prediction 642 663 - -
Spst7g00710 1402 MobiDBLite consensus disorder prediction 246 261 - -
Spst7g00710 1402 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Spst7g00710 1402 MobiDBLite consensus disorder prediction 705 730 - -
Spst7g00710 1402 SUPERFAMILY ARM repeat 291 1394 IPR016024 -
Spst7g00710 1402 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Spst7g00710 1402 MobiDBLite consensus disorder prediction 710 730 - -
Spst7g00710 1402 FunFam Protein peg1 266 516 - -
Spst7g00710 1402 SUPERFAMILY ARM repeat 6 405 IPR016024 -
Spst7g00710 1402 Gene3D - 267 509 IPR011989 -
Spst7g00710 1402 PANTHER CLASP 32 1393 - -
Spst7g00710 1402 Coils Coil 10 30 - -
Spst7g00710 1402 MobiDBLite consensus disorder prediction 243 262 - -
Spst7g00710 1402 Pfam CLASP N terminal 811 1005 IPR024395 -
Spst7g00710 1402 Pfam CLASP N terminal 285 503 IPR024395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00710 Spst-Chr7 7017740 7034858 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00710 K16578 - gmx:100775793 2402.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00710 7 7017740 7034858 Spst7g00710 7 7017740 7034858 ECH
Spst1g03012 1 38723249 38736248 Spst7g00710 7 7017740 7034858 PCT