Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00654 ATGTCCAACAGCAAGATGAAGGGTTTTTTTAAAGGCTTTAGATACTTTGCTCAAATATTTGAGGGTGAAAAAGATAAAGACATACAGATTGGATATCCCACAGATGTAAAGCATGTAGCACATATAGGGTGGGATGGTCCCTCTGTAAATTCTCCCAGCTGGATGAACGAATTTAAAAATTCTCCAGGTGTTGCAGATCTTCAAAATAAAGGACAAGACAATGGAGTCAAACGAGTCCCCGAAGAATCAAAAAGAAGAAGTCATCGAGATCCACCAGATTTATCCAAGGCATCTAAAAGACACTCGATGGGTGTCACGGATTCTCCGACAAAGGAAAAGTCAAGCAAACCGAGAACGAGGAAACCTTCGAACAAGAACAAAGATGATTCCAACCCGACCCGAATGCCCGAGTCCCCGGATCCATTTCAGCTTCCTCCGCCCCTACCCGGACCCGATAATATTACTCCTAAAAAGCCTCGCCGCCATAAGAAAGAGAATCCTAGCGCCGTCAAAGTGAAATCCAAAGCCCAGCCCAGTTCTGATTCTGCATCCCCGGCCCAAACTAGGAACAGCCCAATAGCCACCTTCGATGAAGCCGAACACGATCTTTTGCTCTAA 618 0.4531 MSNSKMKGFFKGFRYFAQIFEGEKDKDIQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKNSPGVADLQNKGQDNGVKRVPEESKRRSHRDPPDLSKASKRHSMGVTDSPTKEKSSKPRTRKPSNKNKDDSNPTRMPESPDPFQLPPPLPGPDNITPKKPRRHKKENPSAVKVKSKAQPSSDSASPAQTRNSPIATFDEAEHDLLL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00654 205 MobiDBLite consensus disorder prediction 49 68 - -
Spst7g00654 205 MobiDBLite consensus disorder prediction 138 154 - -
Spst7g00654 205 SMART PBD_5 30 61 IPR000095 -
Spst7g00654 205 Pfam P21-Rho-binding domain 29 61 IPR000095 -
Spst7g00654 205 MobiDBLite consensus disorder prediction 75 97 - -
Spst7g00654 205 MobiDBLite consensus disorder prediction 45 205 - -
Spst7g00654 205 CDD CRIB 28 59 - -
Spst7g00654 205 FunFam Elongation factor Ts, mitochondrial 23 69 - -
Spst7g00654 205 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Spst7g00654 205 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 4 188 IPR044510 -
Spst7g00654 205 MobiDBLite consensus disorder prediction 105 134 - -
Spst7g00654 205 MobiDBLite consensus disorder prediction 172 194 - -
Spst7g00654 205 Gene3D CRIB domain 24 74 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00654 Spst-Chr7 6557578 6558577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00654 - - vun:114192631 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00654 7 6557578 6558577 Spst7g00654 7 6557578 6558577 ECH
Spst1g03078 1 39328281 39329724 Spst7g00654 7 6557578 6558577 PCT