Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03078 ATGTCCAACAACAATAATAACAACAAGGTGAAGGGTCTCCTTAAAGGCCTAAGATTCATTTCTCAGATATTCGATAATGAAGGCAAAGATTCAGTAATTGAGATTGGTCATCCCACAGATGTAAAGCATGTAGCACATATTGGATATGATGGTCAAGGTCCGTCTGACAATAATCCCTCCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATTCATCTGCACCTAAAGATCATAAAGGAGGCATTCATAGCAAAGAATCCGATAGTTCAATCCAAAGGGCCTCTGAAGATTCAATGGAAAGAAGTTCAAGGTCTGTGAATAGACACAGTGATGACAGTCACTTACTGGACTCGGCCAAATCAAAACGACAATCAAATTCAACGGGGAACATGAGAGAGTCCCGTGCAAAGGAAAAGTCAGACAGACCAAGAAATCCAAAAAGGTCATCCAAACCTTCGCAGCCAAATGATCATCATTCATGCCATGAATCCAAACACACCGACCAACACATGCAGACGAATGATTATCCCCTGCACCACCAAGACAGTGATTTACCACCTAAAAAATCACGCTCCAAGATATCAAAAGATGGTTCCGCTGTTAGTTCATCCAAATCAAGATCAAAAGCATATTCTAGGGATCACAATCACGAAGGCCATGCTAAACGTAACTCCAAATCTACGGACAAACACGAGTCCTTTGAAGAAGAAGAAGGACATTATAAGAGAGGGTCTAGTGAAAATATACTCAAAAGTTATGTAAATTAG 768 0.4062 MSNNNNNNKVKGLLKGLRFISQIFDNEGKDSVIEIGHPTDVKHVAHIGYDGQGPSDNNPSWMNEFKSVPGNSSAPKDHKGGIHSKESDSSIQRASEDSMERSSRSVNRHSDDSHLLDSAKSKRQSNSTGNMRESRAKEKSDRPRNPKRSSKPSQPNDHHSCHESKHTDQHMQTNDYPLHHQDSDLPPKKSRSKISKDGSAVSSSKSRSKAYSRDHNHEGHAKRNSKSTDKHESFEEEEGHYKRGSSENILKSYVN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03078 255 MobiDBLite consensus disorder prediction 208 245 - -
Spst1g03078 255 MobiDBLite consensus disorder prediction 132 195 - -
Spst1g03078 255 CDD CRIB 33 67 - -
Spst1g03078 255 Pfam P21-Rho-binding domain 34 82 IPR000095 -
Spst1g03078 255 Gene3D CRIB domain 31 91 IPR036936 -
Spst1g03078 255 MobiDBLite consensus disorder prediction 45 255 - -
Spst1g03078 255 SMART PBD_5 35 68 IPR000095 -
Spst1g03078 255 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 8 220 IPR044510 -
Spst1g03078 255 MobiDBLite consensus disorder prediction 78 119 - -
Spst1g03078 255 ProSiteProfiles CRIB domain profile. 35 48 IPR000095 -
Spst1g03078 255 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03078 Spst-Chr1 39328281 39329724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03078 - - gmx:102666244 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03078 1 39328281 39329724 Spst7g00654 7 6557578 6558577 PCT