Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00489 ATGCATGACATATGTCTCAACATGCCACCAATGGTTCAGAACTTCGACCCTGAGGACCTCTTCACAAGGCGTTGCATGTGGGTGAATGGACCTGTGATAGTAGGTGCTGGTCCTTCAGGTCTTGCAGTGGCTGCAGGCCTCAAAGACCAAGGTGTTCCATTCATAATCCTTGAGAGAGCAAACTGCATTGCCTCTCTTTGGCAAAACCGCACCTATGATCGCCTCAAGCTTCACCTCCCCAAACAGTTCTGCCAGCTTCCAAACTTCCCTTTCCCTGAGGATTTCCCTGAGTACCCCTCAAAGTTTCAGTTCATAAGCTACCTTGAGTCCTATGCCAAGCACTTTAACATAACCCCTCAGTTCAATGAAACAGTGCAGTCTGCAAAGTATGATGAGACCTTTGGCCTGTGGAGGGTCAAGACCAGGAGGAAAGGACCCTCCTCAGGTGCTGAGATTGAGATTGACTACATTTGCAGGTGGCTTGTGGTTGCTACTGGTGAAAACTCAGAGAAAGTGGTGCCTGAGTTTGAAGGGCTGGGAGAGTTTGGTGGCCATGTCATGCATGCTTGTGATTATAAATCTGGGGTGGGTTTTGGTGGACAGAAAGTTCTTGTTGTTGGGTGTGGAAATTCAGGAATGGAAGTCTCACTTGATCTATGTAACCACAATGCACAACCATCAATGGTGGTTAGAAGTTCGGTTCATGTTTTGCCAAGAGAGATTTTTGGGAAATCTACTTTTGAAGTTGCAGTGATGTTGATGAAGAGGCTACCCCTTTGGATGGTTGATAAGATATTGCTGATTCTGGCACGTTTGATTTTGGGGAATGTTGAAAAGTATGGTTTGAAAAGGCCTTCAGTGGGTCCTTTGGAATTCAAGCACACTGCAGGGAAGACCCCTGTGTTGGACATTGGGGCCCTTGAGAAAATTAGATCTGGCAAAATCAAAGTGGTTCCTGGAATCAGAAGGTTCTTGCGAGGGAAAGTGGAACTTGTCGATGGCCAAGTTCTTCAGATTGATTCTGTGGTTCTTGCCACTGGTTATCACAGCAATGTACCATCATGGTTAAAGTTGTTTTGTACCCTTGTGGCTGAGCCCCCCACAAAGGCTTCTGGCCCTATTGAAAGACCAGGGAAGGAGAATGATTTCTTTTCCAATGATGGGACTCCAAGAAATCCCTTTCCAAATGGGTGGAAAGGGAAAGGTGGTCTTTATGCTGTTGGATTCACAAGGAGAGGCCTTTCTGGTGCTTCTTTGGATGCAATCAATGTGGCTCATGACATTGCCAAGAGTTGGAAAGAGGAAACCAAACAGAAGAGGAAAACTGTGGCTGCACGCCACAGAAGATGCATATCACACTTCTAA 1365 0.463 MHDICLNMPPMVQNFDPEDLFTRRCMWVNGPVIVGAGPSGLAVAAGLKDQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPSKFQFISYLESYAKHFNITPQFNETVQSAKYDETFGLWRVKTRRKGPSSGAEIEIDYICRWLVVATGENSEKVVPEFEGLGEFGGHVMHACDYKSGVGFGGQKVLVVGCGNSGMEVSLDLCNHNAQPSMVVRSSVHVLPREIFGKSTFEVAVMLMKRLPLWMVDKILLILARLILGNVEKYGLKRPSVGPLEFKHTAGKTPVLDIGALEKIRSGKIKVVPGIRRFLRGKVELVDGQVLQIDSVVLATGYHSNVPSWLKLFCTLVAEPPTKASGPIERPGKENDFFSNDGTPRNPFPNGWKGKGGLYAVGFTRRGLSGASLDAINVAHDIAKSWKEETKQKRKTVAARHRRCISHF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00489 454 Gene3D - 31 378 IPR036188 -
Spst7g00489 454 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 32 446 - -
Spst7g00489 454 MobiDBLite consensus disorder prediction 370 392 - -
Spst7g00489 454 Pfam Flavin-binding monooxygenase-like 33 353 IPR020946 GO:0004499|GO:0050660|GO:0050661
Spst7g00489 454 PRINTS FAD-dependent pyridine nucleotide reductase signature 202 220 - -
Spst7g00489 454 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Spst7g00489 454 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Spst7g00489 454 SUPERFAMILY FAD/NAD(P)-binding domain 32 235 IPR036188 -
Spst7g00489 454 SUPERFAMILY FAD/NAD(P)-binding domain 201 432 IPR036188 -
Spst7g00489 454 PRINTS Pyridine nucleotide disulphide reductase class-II signature 198 222 - -
Spst7g00489 454 PRINTS Pyridine nucleotide disulphide reductase class-II signature 30 52 - -
Spst7g00489 454 FunFam Flavin-containing monooxygenase 31 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00489 Spst-Chr7 4298395 4300647 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00489 K11816 - gmx:100818345 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00489 7 4298395 4300647 Spst7g00489 7 4298395 4300647 ECH
Spst1g03017 1 38802977 38804830 Spst7g00489 7 4298395 4300647 PCT