Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00414 ATGCAGTCCAGTCCGTTGCTCCTCGAGGAACCCATCAGAATGGCTTCCATCCTCGAACCATCCAAGGCTGTCAGTTTGAGGTTGGAGCTGAGTTTCTTTCCAGCTATGACGAAGATTGTTGGCACTCTTGGCCCAAAGTCACGCTCAGTTGACGTTATTTCTCAATGTCTTTTGGCAGGAATGTCTGGTATTTTTCCAATGCAACCTTTGATTGCTGTGGCAAGGTTTGATTTTTCATGGGGTGATCCAGAATACCACCAAGAGACGTTGGAAAATTTAAGAGCTGCTATCAAAAGTACCAAGAAACTGTGTGCGGTTATGCTAGACACTGTCGGTCCAGAACTGCAAGTTGTCAACAAAACTGAGCTCGCAATTTCCCTTCAGGCTGACACATTGGTTGTCTTAACTCCTGATCAGAATAAAGAGGCTTCTTCAAATCTTTTGCCTTTAAATTTTAGTGGGCTTTCAAAGGCTGTGAAGAAGGGTGATACTATTTTTATTGGTCAATACCTGTTTACTGGAAGTGAAACAACCTCAGTGTGGCTAGAGGTAAGTGAAGTGAATGGTGATGATGTCACTTGTGTCATAAAAAATTCTGCTACTCTTGCTGGGTCACTGTATACTTTACATGTCTCTCAAATTCGTATTGATCTTCCCACACTAGCCAATAAGGATAAGGAGGTAATAAGCACGTGGGGTGTTCAAAACAATGTAGACTTCCTCTCATTATCATACACCAGGCATGCCGAAGATGTTCGCCATGCCCGTGCCTTTCTCTCTAAATTAGGTGACCTCAAACAGACACAGATATTTGCAAAGATTGAAAATATAGAGGGATTGACACATTTTGATGAGATATTGCGAGAAGCGGATGGTATCATCCTCTCACGTGGAAATTTGGGGATAGATCTTCCACCTGAGAAGGCGTTTTTATTCCAAAAGGCAGCTATTTACAAATGTAACATGGCTGGAAAACCTGCTGTTGTCACACGTGTTGTGGACACTATGACTGATAACCTAAGACCTACTCGTGCAGAAGCAACTGATGTTGCCAATGCAGTGCTGGATGGTAGTGATGCTATTGTTCTTGGGGCAGAGACTTTGCGTGGATTATATCCTGTAGAGACTATTTCCACTGTTGGAAAAATTTGTGCTGAGGCAGAGAAAGTTTATAATCAAGATATATATTTCAAGAAGGCTGTCAAATTTGTGGGAGAGCCAATGACTCATTTGGAATCAATAGCTTCCTCTGCGGTTCGAGCAGCCATCAAGGTTAAGGCTTCTGTTATTATTTGCTTTACTTCATCTGGAAGGGCTGCAAGGTTGATTGCCAAGTACCGTCCGACCATGCCCGTGATATCTGTCGTCATTCCTCAACTAAAGACAAATCAACTACGATGGACTTTCACTGGAGCTTTTGAGGCAAGGCAATCACTTATTGTGAGAGGTCTTTTCCCTATGCTGGCAGATCCGCGACATCCAGCCGAGTCTAAAAGTGGAACAAGTGAATCAATTTTGAAGGTTGCTTTAGACCATGGCAAGGCTTTTGGTATCATAAAGCCACATGATCGAGTTGTTGTTTGCCAGAAAGTTGGTGATTCCTCAGTTGTGAAGATTATTGAGCTTGACGATTAG 1635 0.4281 MQSSPLLLEEPIRMASILEPSKAVSLRLELSFFPAMTKIVGTLGPKSRSVDVISQCLLAGMSGIFPMQPLIAVARFDFSWGDPEYHQETLENLRAAIKSTKKLCAVMLDTVGPELQVVNKTELAISLQADTLVVLTPDQNKEASSNLLPLNFSGLSKAVKKGDTIFIGQYLFTGSETTSVWLEVSEVNGDDVTCVIKNSATLAGSLYTLHVSQIRIDLPTLANKDKEVISTWGVQNNVDFLSLSYTRHAEDVRHARAFLSKLGDLKQTQIFAKIENIEGLTHFDEILREADGIILSRGNLGIDLPPEKAFLFQKAAIYKCNMAGKPAVVTRVVDTMTDNLRPTRAEATDVANAVLDGSDAIVLGAETLRGLYPVETISTVGKICAEAEKVYNQDIYFKKAVKFVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEARQSLIVRGLFPMLADPRHPAESKSGTSESILKVALDHGKAFGIIKPHDRVVVCQKVGDSSVVKIIELDD 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00414 544 SUPERFAMILY PK beta-barrel domain-like 113 203 IPR011037 -
Spst7g00414 544 SUPERFAMILY PK C-terminal domain-like 375 539 IPR036918 -
Spst7g00414 544 Gene3D - 37 379 IPR040442 -
Spst7g00414 544 Gene3D - 380 542 IPR036918 -
Spst7g00414 544 PRINTS Pyruvate kinase family signature 238 252 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 PRINTS Pyruvate kinase family signature 365 381 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 PRINTS Pyruvate kinase family signature 102 118 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 PRINTS Pyruvate kinase family signature 270 296 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 PRINTS Pyruvate kinase family signature 297 321 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 PRINTS Pyruvate kinase family signature 346 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 FunFam Pyruvate kinase 388 530 - -
Spst7g00414 544 FunFam Pyruvate kinase 113 219 - -
Spst7g00414 544 Gene3D - 114 218 IPR015806 GO:0004743|GO:0006096
Spst7g00414 544 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 36 393 IPR015813 GO:0003824
Spst7g00414 544 PANTHER PYRUVATE KINASE 35 529 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 Pfam Pyruvate kinase, barrel domain 37 391 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst7g00414 544 Pfam Pyruvate kinase, alpha/beta domain 412 536 IPR015795 -
Spst7g00414 544 NCBIfam pyruvate kinase 37 532 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00414 Spst-Chr7 3239561 3252169 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00414 K00873 - gmx:100804313 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02800 1 36566581 36574366 Spst7g00414 7 3239561 3252169 ECH
Spst7g00414 7 3239561 3252169 Spst7g00414 7 3239561 3252169 ECH