Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02800 ATGCATTCCGGTCACTTACTTCTCGAGGAACCCATTCGCATGGTTTCTATTCTCGAACCATCCAAGGCCAGTTTCTTTCCCGCAATGACGAAGATCGTTGGTACACTGGGTCCCAAATCTCGATCGGTGGAGGTTATTTCTGCGTGCCTCAAAGCTGGAATGTCAGTGGCTCGTTTCGACTTCTCTTGGGGTGATCCTGAATATCACCAAGAGACTTTGGAGAATTTGAAATCTGCTATCAAATCTACTAAGAAACTCTGTTCTGTTATGTTAGACACTGTGGGAGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAATCGATCTCGCTTGAGGCTGATGGTCAGGTTGTTCTGACCCCTGACCGGGGACAAGAAGCATCTTCACAAATACTGCCTATCAATTTTGATGGACTGGCCAAGTCAATGAAGAAGGGAGACACAATTTTTGTTGGTCAATACTTGTTCACGGGAAGTGAAACTACTTCTGTATGGCTAGAGGTGTCTGAGGTTACAGGTCAGGACGTTATTTGTACTATAAAGAATTCGGCAACATTAGCAGGGTCATTGTTCACTTTGCATGCCTCACAAGTTCATATTGATTTGCCCACCCTCACTGATAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTGTCATTGTCATATACTAGGCATGCTGAAGATGTTCGCCAGGCCCGTGAATTCCTTTCTAAGTTAGGTGATCTAAGCCAGACTCATATATTTGCAAAGATTGAAAATGTTGAGGGACTGACCCATTTTGATGAAATTCTACAAGAAGCAGATGGTATCATCCTTTCCCGTGGGAATTTGGGGATTGATCTTCCCCCGGAGAAGGTATTTTTCTTTCAAAAATCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCCGTCTTAGATGGAAGTGATGCAATACTTCTAGGTGCTGAGACGTTGCGTGGGTTATACCCTGTTGAGACTATTTCTACAGTTGGCAAAATTTGTGCTGAAGCTGAGAAAGTTTTTAATCAAGACGTTTATTTTAAGAAAACTGTCAAATATGTTGGAGAACCCATGTCCCACTTGGAATCTATAGCGTCCTCTGCGGTACGAGCAGCTATTAAGGTGAAGGCTTCTGTTATTATTTGCTTCACTTCATCTGGAAGGGCTGCAAGATTGATAGCAAAATATAGGCCAACCATGCCTGTTCTCTCTGTTGTGATCCCCCGACTCAAGACAAATCAGCTGAAATGGAGCTTTAGCGGAGCTTTTGAGGCTAGGCAGTCACTTATTGTAAGGGGCCTCTTTCCCATACTTGCCGATCCTCGACATCCTGCCGAGTCAACTAGTGCCTCAAACGAGTCTATTCTGAAGGTTGCCCTTGATCATGGAAAAGCAGCAGGAGTTATAAAGTCGCACGATCGTGTAGTCGTTTGCCAGAAAGTTGGTGATTCATCTGTGGTTAAGATTATCGAGCTTGAAGATTAA 1584 0.4369 MHSGHLLLEEPIRMVSILEPSKASFFPAMTKIVGTLGPKSRSVEVISACLKAGMSVARFDFSWGDPEYHQETLENLKSAIKSTKKLCSVMLDTVGAEMQVVNKSEKSISLEADGQVVLTPDRGQEASSQILPINFDGLAKSMKKGDTIFVGQYLFTGSETTSVWLEVSEVTGQDVICTIKNSATLAGSLFTLHASQVHIDLPTLTDKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTHIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDVYFKKTVKYVGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPILADPRHPAESTSASNESILKVALDHGKAAGVIKSHDRVVVCQKVGDSSVVKIIELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02800 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 376 IPR015813 GO:0003824
Spst1g02800 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 Pfam Pyruvate kinase, alpha/beta domain 395 519 IPR015795 -
Spst1g02800 527 NCBIfam pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 PANTHER PYRUVATE KINASE 27 512 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst1g02800 527 Gene3D - 30 370 IPR040442 -
Spst1g02800 527 SUPERFAMILY PK C-terminal domain-like 358 522 IPR036918 -
Spst1g02800 527 FunFam Pyruvate kinase 96 202 - -
Spst1g02800 527 Gene3D - 371 513 IPR036918 -
Spst1g02800 527 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Spst1g02800 527 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Spst1g02800 527 FunFam Pyruvate kinase 371 513 - -
Spst1g02800 527 Pfam Pyruvate kinase, barrel domain 30 376 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02800 Spst-Chr1 36566581 36574366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02800 K00873 - gmx:100807864 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02800 1 36566581 36574366 Spst1g02800 1 36566581 36574366 ECH
Spst1g02800 1 36566581 36574366 Spst7g00414 7 3239561 3252169 ECH
Spst1g02800 1 36566581 36574366 Spst7g00951 7 16013317 16020412 PCT