Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00372 ATGGATCATATAAGTAACGAGGCTAGTGTTGACCGTTTTGCGATTGGCCCTTCTAGTATTATTGGCAGGACTATTGCTTTCAGGGTTCTCTGCTGCAAGTCTATCTCAAAATTGAGGCATCAGATACTCTTTGTGTTGTTGGATATCTTCCATAGTTTTAGGCGATTTTGGGGACCCATTGTGTCATGGTTGCACCCAAGAAACCCGCAGGGGATATTGGCAATGATGACAATAGTTGCTTTCTTGTTGAAACGGTACACCAATGTGAAGGTGAGGGCTGAGATGGTATATAGGCGGAAATTTTGGAGAAATATGATGAGATCTGCATTGACCTATGAGGAGTGGGCTCATGCAGCCAAGATGCTTGATAGAGAGACACCAAAGATGAATGAATCAGACCTTTATGATGTGGAGCTGGTGAATAACAAGCTTGAAGAGCTTCGTCATCGCCGGCAAGAGGGGTCTCTTAGAGATATAATATTTTTTATGCGTGCAGATCTTGTCAGAAATCTAGGTAATATGTGTAACCCTGAACTCCACAAAGGTAGGCTTCAGATGCCAAGACTAATCAAAGAGTATATTGATGAGGTATCAACTCAGTTGAGAATGGTCTGCAACTCTGATTCAGAGGAGCTTGCATTGGAAGAAAAGCTATCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACCGCTTTGTTGTTAAGTGGGGGTGCTTCCCTTGGAGCTTTTCATGTTGGTGTGGTTAAAACACTGGTAGAGCATAAACTTTTGCCGAGGGTTATTGCTGGTTCAAGTGTAGGATCCATTATGTGCGCTATCGTTGCCACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTTGAGGATTCATTGCACTCATTACAGTTTTTTGATCAACTGGGTGGGATTTTTACAGTTGTGAAGAGGGTCACAACATATGGTGCAGTTCACGAGATCAGACATTTGCAAATGATGCTCAGGAATCTAACAAACAATCTCACATTTCAAGAAGCATATGATATGACGGGTCGAATTCTTGGGATTACAGTTTGTTCTCCAAGAAAGCATGAACCACCTAGATGTCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTCGAGGCTCAGGAATTGATGGCAAAGGATAGAAGCGGAGAGATTGTTCCTTACCATCCTCCATTTAATTTGGGTCCTGAAAAGGGTTCCACTCCAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAACGTCAATCATTTTATTGTTAGTCAAGCCAATCCTCATATTGCACCATTATTGAGAATGAAAGAATTTATACGAGCTTGTGGAGGTAATTTTGCAGCAAAGCTTGCTCATCTAGTAGAGATGGAGGTGAAACATAGATGTAATCAAGTACTGGAACTCGGCTTTCCATTAGTTGGACTTGCCAAACTGTTTGCTCAAGAGTGGGAGGGTGATGTAACAGTTGTTATGCCTGCAACTCTTTCTCAGTACTTAAAAATCATACAGAACCCTTCTTATGTAGAACTTCAAAAGGCAGCTAATCAAGGGAGAAGAGGCACCTGGGAGAAGCTTTCTGCCATAAAAGCAAATTGTGGAATTGAGCTTGCTCTTGATGAGTCTGTTGCAATGCTCAATCATATGAGACGACTCAAAAAAAGTGCGGAGAGAGCTGCTGTTTCTCATGGTCTGCCCAGCACAGTCAAATTCAGTGGTTCAAGAAGAATTCCATCGTGGAATGTGATTGCACGAGAGAATTCTACAGGATCCCTAGAAGACCTTCATACAGATGCTGCTTCCTCATTGCATCAAGGGGTCAATAGTAGTCCCCGTGGAGCCACTGGTAAAAATTGGAAGTCCCACCGGAACATTCATGAGGCAAGTGACAGTGAATCTGAAAGTGCTGACCTGAATTCTTGGACCAGATCTGGTGGACCTTTGATGAGAACTACATCAGCAGATACGTTCATTGACTTTGTCCAAAACTTAGAAGTTGATACTGACCTACATAGAAGCAAGGTGACTCAGACTAGCCCTCGTGGTTTTCAGCATCACAGTTCAAGGCACACAACTCCTGATAAGTGCTCCGAGAGCACAGAATTTGATCAGAAAGAAAATGGCAACAGGGTTGTCATGAATGGATCTAACATAATGGTAACTGAAGGTGATCTTTTACAGCCTGAAAGGATCCATAATGGGATTGTATTTAATGTTGTCAAGAAAGAAGACTTGACACCTTCAAATAGGAATCATGATTATAATAGTTATAACCATGAAGTGGTTGAATGTGTACAAATTGACTTTCCAGGGAAGGAGATGGATGCTGCTAGCTCAGCTTCTGAAAATGGTGAGGAGGAATCCACAATTTCCAGCTCTTTAACTGATAAACTAGATTATCATTCCACAGAACATTCCAGGACAGATTTGGGTATGGATCAAAACATTGTTGATAGTTAA 2529 0.4215 MDHISNEASVDRFAIGPSSIIGRTIAFRVLCCKSISKLRHQILFVLLDIFHSFRRFWGPIVSWLHPRNPQGILAMMTIVAFLLKRYTNVKVRAEMVYRRKFWRNMMRSALTYEEWAHAAKMLDRETPKMNESDLYDVELVNNKLEELRHRRQEGSLRDIIFFMRADLVRNLGNMCNPELHKGRLQMPRLIKEYIDEVSTQLRMVCNSDSEELALEEKLSFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRVIAGSSVGSIMCAIVATRSWPELQSFFEDSLHSLQFFDQLGGIFTVVKRVTTYGAVHEIRHLQMMLRNLTNNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEKGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRMKEFIRACGGNFAAKLAHLVEMEVKHRCNQVLELGFPLVGLAKLFAQEWEGDVTVVMPATLSQYLKIIQNPSYVELQKAANQGRRGTWEKLSAIKANCGIELALDESVAMLNHMRRLKKSAERAAVSHGLPSTVKFSGSRRIPSWNVIARENSTGSLEDLHTDAASSLHQGVNSSPRGATGKNWKSHRNIHEASDSESESADLNSWTRSGGPLMRTTSADTFIDFVQNLEVDTDLHRSKVTQTSPRGFQHHSSRHTTPDKCSESTEFDQKENGNRVVMNGSNIMVTEGDLLQPERIHNGIVFNVVKKEDLTPSNRNHDYNSYNHEVVECVQIDFPGKEMDAASSASENGEEESTISSSLTDKLDYHSTEHSRTDLGMDQNIVDS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00372 842 Gene3D Cytosolic phospholipase A2 catalytic domain 221 443 - -
Spst7g00372 842 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Spst7g00372 842 Pfam Domain of unknown function (DUF3336) 97 226 IPR021771 GO:0004806|GO:0006629
Spst7g00372 842 MobiDBLite consensus disorder prediction 622 640 - -
Spst7g00372 842 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Spst7g00372 842 CDD Pat_SDP1-like 163 570 - -
Spst7g00372 842 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 50 571 - -
Spst7g00372 842 SUPERFAMILY FabD/lysophospholipase-like 229 574 IPR016035 -
Spst7g00372 842 MobiDBLite consensus disorder prediction 622 663 - -
Spst7g00372 842 MobiDBLite consensus disorder prediction 699 730 - -
Spst7g00372 842 MobiDBLite consensus disorder prediction 710 728 - -
Spst7g00372 842 MobiDBLite consensus disorder prediction 804 820 - -
Spst7g00372 842 MobiDBLite consensus disorder prediction 796 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00372 Spst-Chr7 2921907 2925372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00372 4 801 Acyl Lipid Metabolism Gene Families AT5G04040 74.814 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00372 K14674 - gmx:100807526 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00372 7 2921907 2925372 Spst7g00372 7 2921907 2925372 ECH
Spst1g03451 1 43275264 43279994 Spst7g00372 7 2921907 2925372 PCT