Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03451 ATGGATCATATTAGTAATGAGGCTGGAGTTGACCGTTTTCCAATAGGTCCTTCAGACATTATTGGGAGAACGGTTGCTTTCAGGGTTCTATTTTGTAAGTCCATGTCACATTTTAGGCACCAGATATTTCATGTGCTGTTAGATCTCTTCTATAGGTTTAGGGGGGGTTTGGCATCCTTTATATCATGGTTGCATCCCAGAAATCCTCAGGGGATACTGGCAATGATGACAATTGTTGCTTTCTTGTTGAAACGATATACAAATGTGAAAGTAAGGGCTGAAATGGCGTATAGGAGGAAGTTTTGGAGAAATATGATGAGATCTGCTTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACAACAAAGATGAATGAATCAGACCTTTATGATGTGGAATTGGTGAGGAACAAGCTTCAAGAGCTCCGCCACCGTCGGCAAGAGGGATCTCTTAGAGATATAATATTTTGTATGCGTGCCGATCTCGTTAGAAATTTAGGTAATATGTGTAATCCTGAACTACACAAGGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAATACATTGATGAAGTAACGACTCAATTGAGAATGGTCTGTGGTTCTGATTCGGAGGAGCTATCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGGCATGCATTTGGGAGGACTGCTTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTGGGTGTAGTTAAAACACTGGTAGAGCATAAACTCTTGCCTAGGATAATTGCTGGTTCAAGTGTGGGATCCATTATGTGTGCCGTTGTTGCCACTAGGACTTGGCCTGAGCTTCAGAGCTTTTTCGAAGATTCCTGGCACTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTAAAGAGAGTCACAACATTTGGTGCTGTTCATGAGATTAGACAGTTGCAAATGATGTTGAGGCATCTGACAAGCAACCTTACCTTTCAAGAAGCTTATGACATGACAGGTAGAATTCTTGGAATCACGGTTTGTTCCCCAAGGAAGCACGAACCACCTAGATGTCTTAACTACTTGACTTCACCCCATGTGGTTATATGGAGTGCAGTCACTGCATCTTGTGCCTTTCCTGGTCTTTTTGAGGCTCAAGAGTTGATGGCAAAGGATAGAAGTGGGGAGATTGTTCCTTACCATCCTCCATTTAACTTAGGTCCTGAAGAGGGCTCCACACCAGCGCGCCGTTGGAGGGATGGTAGCTTAGAGATTGATTTACCTATGATGCAGTTGAAAGAACTATTCAATGTCAATCATTTTATAGTTAGCCAGGCCAACCCTCATATTGCACCATTATTGAGATTGAAAGAATTTGTGCGGAATTATGGGGGAAACTTTGCTGCCAAGCTTGCTCATCTTGTAGAGATGGAGGTCAAACATAGATGTAATCAAATACTGGAACTTGGTTTTCCATTAGGTGGACTTGCTAAGTTGTTTGCTCAAGACTGGGAAGGTGATGTGACTGTTGTTATGCCTGCAACTCTTGCTCAGGAGTATATGCTTCATTTACTAAAAGATGCTTCAGTTAGTAATTATGACTGTGTCCTGTTCCAGTACACCAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCGGCCAACCAAGGGAGAAGATGTACATGGGAGAAACTTTCAGCCATAAAAGCAAATTGTGGCATTGAGCTTGCCCTTGATGAGTGTGTACTGATTCTCAATCACATGAGAAGGCTAAAAAGAAGTGCTGCGAGGGCTGCTTCCGCTTCTCATGGTTTGTCCAGTACTGTCAAGTTCAGTGCTTCTAAAAGAATTCCTTCATGGAATTGCATTGCAAGAGAGAATTCAAGCGGCTCCCTTGAGGACCTTACTGATGTTGCTTCCTCTTTGCATCAAAGTATTAGCAGTTCCAATGTGACCAGTGGTAAAACTAGGAAGACCCACCGTGGCATTCACGAAGGAAGTGACAGTGACTCTGAAAGTGTTGATTTGAACTCTTGGACAAGATCTGGTGGGCCTTTGATGAGAACTACATCGGCAAATATGTTCATCGATTTTCTCCAAAACTTAGAAGTTGATACTGAATCAAATAAAGTCGTAGTAAGTCATGCTAACCCTAATGAATTTCAGTATCGTAGCCCCAGGCTCACAACTCTGGATAGGAACTCCGATAGCACAGAATCTGAGCAAAGGGAAATTGGCAGCAGGGTGGTTAATGGGTCCAGCATACTAGTGACTGCTGGTGATTTTTTGCAGCCTGAAAGGATCCATAATGGCATTGTGTTTAATGTTGTCAAGAAAGAAGATGTGACACCCTTAAACAGGAGTCATGATTTTGAAAATTACAACAATGAAGTTGCTGAATGTGTCCAAGATGAGTGTCCAGGGAAGGAGATGGATGCTGGTAGTTCAGCTTCTGAACTTGGAGATGATGAATCCACACCAGCCACGTCCTTAACCGCATTTCCAGATCATATTTCTATGGATCATCATTCGGGCACAGATTCGAGTGTAGATCGGAGCATTGTTGATGGCTAG 2589 0.4264 MDHISNEAGVDRFPIGPSDIIGRTVAFRVLFCKSMSHFRHQIFHVLLDLFYRFRGGLASFISWLHPRNPQGILAMMTIVAFLLKRYTNVKVRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDKETTKMNESDLYDVELVRNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCGSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRTWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRNYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQEYMLHLLKDASVSNYDCVLFQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVLILNHMRRLKRSAARAASASHGLSSTVKFSASKRIPSWNCIARENSSGSLEDLTDVASSLHQSISSSNVTSGKTRKTHRGIHEGSDSDSESVDLNSWTRSGGPLMRTTSANMFIDFLQNLEVDTESNKVVVSHANPNEFQYRSPRLTTLDRNSDSTESEQREIGSRVVNGSSILVTAGDFLQPERIHNGIVFNVVKKEDVTPLNRSHDFENYNNEVAECVQDECPGKEMDAGSSASELGDDESTPATSLTAFPDHISMDHHSGTDSSVDRSIVDG 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03451 862 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Spst1g03451 862 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Spst1g03451 862 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Spst1g03451 862 Gene3D Cytosolic phospholipase A2 catalytic domain 229 307 - -
Spst1g03451 862 Gene3D Cytosolic phospholipase A2 catalytic domain 308 493 - -
Spst1g03451 862 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 35 592 - -
Spst1g03451 862 MobiDBLite consensus disorder prediction 813 862 - -
Spst1g03451 862 SUPERFAMILY FabD/lysophospholipase-like 229 596 IPR016035 -
Spst1g03451 862 MobiDBLite consensus disorder prediction 651 681 - -
Spst1g03451 862 CDD Pat_SDP1-like 163 591 - -
Spst1g03451 862 MobiDBLite consensus disorder prediction 824 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03451 Spst-Chr1 43275264 43279994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03451 4 820 Acyl Lipid Metabolism Gene Families AT5G04040 72.135 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03451 K14674 - gmx:100791261 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03451 1 43275264 43279994 Spst1g03451 1 43275264 43279994 ECH
Spst1g03451 1 43275264 43279994 Spst7g00372 7 2921907 2925372 PCT