Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00331 ATGTCTAGCTCAGCAAAAATTATGGATCCTGCTTTTCAGGGAGTTGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCGTTGCCCAAATCTGATCATGGGAAATTCTACATGGGAGATTCGTACATCATCTTGCAGTTTGGTGATAAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATGCTGCTCTTGGAGGGCGTGCAGTCCAGCACAGGGAAATCCAAGGACATGAATCTGACAAGTTTTTATCATACTTTAGACCATGTATAATACCATTAGAGGGTGGTGTTGCATCTGGGTTTAGAAAACCTGAAGAAGAGGAGTTCGAAACACGTTTGTATGTGTGCAGAGGGAAAAGAGTTGTTAGGTTGAGACAGGTCCCTTTTGCAAGGTCTTCATTGAACCATGATGATGTATTCATACTAGACACTCAGGATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCAAAGGCTTTGGAAGTTATACAACTCCTTAAAGAAAAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGACGATGGCAAGTTAGACACAGAGTCAGACTCTGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAAGTAATAAGTGAGGATGATATTATTCCAGAGACAATTCCTGCTCAGCTTTATAGTATTGTTGATGGTGACATTAATCCCGTGGAAGGTGAACTGTCTAAATCATTGTTGGAAAACAACAAATGCTATTTATTGGACTGTGGTGCTGAGATATTTGTCTGGGTTGGTCGCGTGACACAAGTTGAAGAACGAAAGGCTGCCGGCCAGGCTGTTGAGGAGTTTGTTACAAGCCAAAATAGGCCAAAAGCTACTAGGATAACAAGGGTTATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTAATACCAATGCGGAGGAAGGAAGAGGAAAAGTTGCAGCACTGCTTAAGCAACAAGGAATGGGTGTCAAAGGAATGACAAAAAATACCCCTATAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGGTATGGCTAATTAATGGAAATGCCAAGACTGCATTGCCAAAAGAGGACATTGGTAAATTTTATAGTGGAGATTGTTACATTGTTCTGTACACTTACCACGCTGGTGAGAGGAAAGAAGACTACTTCTTGTGCTGTTGGTTTGGCAAAGACAGCACCGAGGAGGACCAAACAACAGCTACTCGGTTGACCAATACAATGTTTACCTCATTAAAGGGTAGACCTGTACAGGGTCGCATCTTCGAAGGCAAAGAACCACCTCAATTTGTTGCTCTTTTCCAACCAATGGTGATACTTAAGGGAGGATTGAGCTCTGGATACAAGACATCAATAGAAGAGAAAGGTGCATCAGATGAGACATACACAACAGAGTGTATTGCACTTATTCGAATTTCTGGAACTTCTATTCATAACAATAAATCAGTACAAGTTGATGCAGTGCCGTCATCATTGAATTCTACGGAGTGTTTTGTCCTGCAATCCGGCTCTACAATGTTCACCTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCAGCAAAGGTTGCTGAATTTTTAAGGCCAGGAGTTACTTTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTCTGCGCTAGGAGGAAAACAAGCTTACACCAGCAAGAAAGTTGTTAACGAGGTTGTCAGAGATCCACATTTGTTCACTTTATCATTTAATAAAGGAAAGTTCAAGGTAGAGGAGGTTTACAACTTCACTCAAGATGACCTGCTGCCAGAGGATATCCTTGTACTTGACACACATGCAGAAGTGTTTATTTGGGTTGGTCATTCTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATATGGCGGCATCTTTGGAGGGACTATCTCCACATGTACCAATATATAAAGTAACGGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCATGGGATAATGCAAAAGCTATGGTTCAGGGAAACTCATTTCAGAAAAAGGTGGCATTATTCTTTGGAATTGGCCATGCTGTCGAGGATAAGTCAAACGGGTCAAGTCAAGGGGGACCAAGACAAAGAGCTGAAGCTTTGGCTGCCTTATCTAATGCATTTAGTTCATCATCTGAGAAAGTATCCAGTGCGACACAAGATAGATTGAATGGTTTAAGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCCGCTTTAAACTCTGCATTTAATTCATCATCTGGGCCAAAGGCTGTAACTCCTAGGGCATCTGGAAAAGGTCAAGGATCACAAAGAGCAGCAGCGGTGGCTGCTCTTTCATCTGTTCTTACTGCTGAAAAGAAGAAAAATACACCTGATGGGTCTCCTGTGACTGGCAATAGTCCTCTCACTGAAAATAGTCCCACTGTTCTTGCTGCAGAAACTAAAAGTGATTCTTCAGAAGTTGAGGAAGTTGCAGAAGCCAAGGAAACAACAGAGGAACTTGCCCCTGAAACCGGTAGCAATGAGGATATGGAAACAAAACAAGAAAACGTGGACGCGGCAAATGATAGTCAAAGGACGTTCAGTTATGAAGAATTAAAGAGCAAATCTGTCAATATAGCTGGAATTGATCTTAAACGGAGAGAGGCCTATCTGTCGGAGGAGGAGTTCAATAATGTTTTTGGAATGGCAAAAGAAGCATTTTACAAGTTGCCAAGATGGAAGCAAGATATGCTGAAAAAGAAATTCGAATTGTTGGGGAGAAATGCGCGTAAGAAACGCGTTTGGGTGGCTTTTATGAATGATCCAAAATGGAAGTTATACGAGTACATAGTATTAAAAAGGTTATTGTCTGGTCCCCGCCGACAGAATTTGTCACTCTTGGCAAAGGAAGGTTCCTGA 3021 0.4158 MSSSAKIMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQFGDKDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFRPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRLRQVPFARSSLNHDDVFILDTQDKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETIPAQLYSIVDGDINPVEGELSKSLLENNKCYLLDCGAEIFVWVGRVTQVEERKAAGQAVEEFVTSQNRPKATRITRVIQGYETHSFKSNFDSWPSGSANTNAEEGRGKVAALLKQQGMGVKGMTKNTPINEEIPPLLEGGGKIEVWLINGNAKTALPKEDIGKFYSGDCYIVLYTYHAGERKEDYFLCCWFGKDSTEEDQTTATRLTNTMFTSLKGRPVQGRIFEGKEPPQFVALFQPMVILKGGLSSGYKTSIEEKGASDETYTTECIALIRISGTSIHNNKSVQVDAVPSSLNSTECFVLQSGSTMFTWHGNQCSFEQQQLAAKVAEFLRPGVTLKHAKEGTESSAFWSALGGKQAYTSKKVVNEVVRDPHLFTLSFNKGKFKVEEVYNFTQDDLLPEDILVLDTHAEVFIWVGHSVDPKEKQNAFEIGQKYIDMAASLEGLSPHVPIYKVTEGNEPCFFTTYFSWDNAKAMVQGNSFQKKVALFFGIGHAVEDKSNGSSQGGPRQRAEALAALSNAFSSSSEKVSSATQDRLNGLSQGGPRQRAEALAALNSAFNSSSGPKAVTPRASGKGQGSQRAAAVAALSSVLTAEKKKNTPDGSPVTGNSPLTENSPTVLAAETKSDSSEVEEVAEAKETTEELAPETGSNEDMETKQENVDAANDSQRTFSYEELKSKSVNIAGIDLKRREAYLSEEEFNNVFGMAKEAFYKLPRWKQDMLKKKFELLGRNARKKRVWVAFMNDPKWKLYEYIVLKRLLSGPRRQNLSLLAKEGS 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00331 1006 MobiDBLite consensus disorder prediction 756 811 - -
Spst7g00331 1006 SUPERFAMILY VHP, Villin headpiece domain 893 959 IPR036886 GO:0003779|GO:0007010
Spst7g00331 1006 Gene3D Villin headpiece domain 882 963 IPR036886 GO:0003779|GO:0007010
Spst7g00331 1006 Gene3D Severin 5 112 IPR029006 -
Spst7g00331 1006 MobiDBLite consensus disorder prediction 756 771 - -
Spst7g00331 1006 PANTHER VILLIN 6 949 IPR007122 GO:0051015
Spst7g00331 1006 SUPERFAMILY Actin depolymerizing proteins 364 509 - -
Spst7g00331 1006 SUPERFAMILY Actin depolymerizing proteins 9 129 - -
Spst7g00331 1006 MobiDBLite consensus disorder prediction 856 892 - -
Spst7g00331 1006 MobiDBLite consensus disorder prediction 784 806 - -
Spst7g00331 1006 CDD gelsolin_S1_like 12 105 - -
Spst7g00331 1006 SMART VHP_1 924 959 IPR003128 GO:0003779|GO:0007010
Spst7g00331 1006 Pfam Villin headpiece domain 924 958 IPR003128 GO:0003779|GO:0007010
Spst7g00331 1006 CDD gelsolin_S6_like 603 701 - -
Spst7g00331 1006 CDD gelsolin_S2_like 119 213 - -
Spst7g00331 1006 FunFam Villin-like 1 595 716 - -
Spst7g00331 1006 Pfam Gelsolin repeat 616 694 IPR007123 -
Spst7g00331 1006 Pfam Gelsolin repeat 515 564 IPR007123 -
Spst7g00331 1006 Pfam Gelsolin repeat 133 198 IPR007123 -
Spst7g00331 1006 Pfam Gelsolin repeat 245 318 IPR007123 -
Spst7g00331 1006 Pfam Gelsolin repeat 389 464 IPR007123 -
Spst7g00331 1006 MobiDBLite consensus disorder prediction 823 855 - -
Spst7g00331 1006 FunFam Villin-like 1 112 228 - -
Spst7g00331 1006 SUPERFAMILY Actin depolymerizing proteins 492 593 - -
Spst7g00331 1006 CDD gelsolin_S5_like 501 589 - -
Spst7g00331 1006 CDD gelsolin_S3_like 235 324 - -
Spst7g00331 1006 PRINTS Gelsolin family signature 451 471 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 304 325 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 392 408 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 418 436 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 514 534 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 655 674 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 574 593 IPR007122 GO:0051015
Spst7g00331 1006 PRINTS Gelsolin family signature 626 648 IPR007122 GO:0051015
Spst7g00331 1006 Gene3D Severin 597 716 IPR029006 -
Spst7g00331 1006 FunFam Gelsolin 500 594 - -
Spst7g00331 1006 MobiDBLite consensus disorder prediction 823 899 - -
Spst7g00331 1006 SUPERFAMILY Actin depolymerizing proteins 577 699 - -
Spst7g00331 1006 ProSiteProfiles Headpiece (HP) domain profile. 895 959 IPR003128 GO:0003779|GO:0007010
Spst7g00331 1006 SUPERFAMILY Actin depolymerizing proteins 204 326 - -
Spst7g00331 1006 Gene3D Severin 235 335 IPR029006 -
Spst7g00331 1006 Gene3D Severin 500 594 IPR029006 -
Spst7g00331 1006 Gene3D Severin 113 223 IPR029006 -
Spst7g00331 1006 FunFam Villin-4 229 335 - -
Spst7g00331 1006 SUPERFAMILY Actin depolymerizing proteins 110 218 - -
Spst7g00331 1006 CDD gelsolin_S4_like 367 468 - -
Spst7g00331 1006 Gene3D Severin 370 499 IPR029006 -
Spst7g00331 1006 SMART VILL_6 120 215 IPR007122 GO:0051015
Spst7g00331 1006 SMART VILL_6 19 98 IPR007122 GO:0051015
Spst7g00331 1006 SMART VILL_6 501 588 IPR007122 GO:0051015
Spst7g00331 1006 SMART VILL_6 605 700 IPR007122 GO:0051015
Spst7g00331 1006 SMART VILL_6 373 471 IPR007122 GO:0051015
Spst7g00331 1006 SMART VILL_6 232 325 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00331 Spst-Chr7 2593629 2611452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00331 - - gmx:100788765 1647.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00331 7 2593629 2611452 Spst7g00331 7 2593629 2611452 ECH
Spst1g03400 1 42621667 42631646 Spst7g00331 7 2593629 2611452 PCT