Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00318 ATGGAAAATGAGATTGGATTCTCCAAAGACTTCTATATGGGAGAAGCACCTATTATCGCTCAAGACCTGCAGAATGGCAATGGCAATGGCGTTGAATCAAAAAGTGGGACTTTCGAAACGGGTACTATCATTGGTGATAAAAAGTATGTCATTGGTGGAACCGATGGTGAAACTTTATCTGTTAAAGTTCAGTTTCTTGACAACAACTGTCTTGGCGAATGGGTTCATGTTGTTGAACTAGGCACCAAACCCATTTCATGTAATGGTCACTCAGCCGTGCTTTTGAAAAACAGAATACTAATTCTTAAGAAAAATTCTAACCCAGATGACTGTATATGGTTTCTGGAGGTGGACACTCCATTTGTCAGGCAGCAGCAGAAAAAAAATTCGGGGACTGAGGTTGTAGCATGGAGTAAGGGTGTGATTGGCAATGCCGAGAAACCTGTTGTTATCAGTGGTCCTTCGGGAGTAGGTAAAGGAACATTGATATCTATGCTCATGAAGGAGTTCCCTTCTATGTTTGGCTTCTCTGTGAGCCACACAACCCGTGCCCCCAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACTGAAAAGAATGTTATGGAGAAAGAGATTAAAGATGGAAAGTTTCTGGAGTTTGCTTCTGTCCATGGAAATCTATATGGGACCAGTGTTGAGGCTGTGGAGGTGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAGATCCGTGAGGGCTTCTTCTCTAGAAGCCATGCTCATCTTTATCTGCCCCCCATCAATGGACGAGCTGGAGAAGCGTCTTCGAGATCGAGGGACAGAGACAGAAGAACAAGTCCTAAAACGATTACGAAATGCTAAGGCTGAGATTGAGCAAGGGATTTCATCAGGCATATTTGATCACATCTTATACAATGATAATCTTGGGGAGTGTTATGAGAATCTGAAGAAATTATTGGGACTTGATGGATATGCCACTCCTCCCAAGTCTGTACCACAAGAGATAAATCTGCCAAGGGATCATTCACTGTCAAAAATTGATGACAAAATCATCATAAATTCCACCTCTTCAAAACCAGAAAAGGAGTCAAAGAACTTGATCATGTTAGATGTCTCCTCACTTAAAGGGGGTGCACCTGGACGGACAAGGGGACTTAATTTTCAAGTCATTGACTCGTTTTCGGAAGGCTTCAATGGCAATGGGAATGGACCAATTTAA 1242 0.4235 MENEIGFSKDFYMGEAPIIAQDLQNGNGNGVESKSGTFETGTIIGDKKYVIGGTDGETLSVKVQFLDNNCLGEWVHVVELGTKPISCNGHSAVLLKNRILILKKNSNPDDCIWFLEVDTPFVRQQQKKNSGTEVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHGNLYGTSVEAVEVVSDAGKRCILDIDVQGARSVRASSLEAMLIFICPPSMDELEKRLRDRGTETEEQVLKRLRNAKAEIEQGISSGIFDHILYNDNLGECYENLKKLLGLDGYATPPKSVPQEINLPRDHSLSKIDDKIIINSTSSKPEKESKNLIMLDVSSLKGGAPGRTRGLNFQVIDSFSEGFNGNGNGPI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00318 413 SMART gk_7 145 331 IPR008145 -
Spst7g00318 413 SUPERFAMILY Galactose oxidase, central domain 39 125 IPR011043 -
Spst7g00318 413 ProSitePatterns Guanylate kinase-like signature. 181 198 IPR020590 -
Spst7g00318 413 Gene3D - 142 333 IPR027417 -
Spst7g00318 413 CDD GMPK 148 324 - -
Spst7g00318 413 FunFam Guanylate kinase 2 139 331 - -
Spst7g00318 413 FunFam Guanylate kinase 1 178 237 - -
Spst7g00318 413 ProSiteProfiles Guanylate kinase-like domain profile. 146 328 IPR008144 -
Spst7g00318 413 PANTHER GUANYLATE KINASE-RELATED 46 376 - -
Spst7g00318 413 Pfam Guanylate kinase 146 327 IPR008145 -
Spst7g00318 413 NCBIfam guanylate kinase 147 327 IPR017665 GO:0004385|GO:0006163
Spst7g00318 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00318 Spst-Chr7 2478632 2485052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00318 K00942 - gmx:100812658 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00318 7 2478632 2485052 Spst7g00318 7 2478632 2485052 ECH
Spst1g03373 1 42323568 42325858 Spst7g00318 7 2478632 2485052 PCT