Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03373 ATGTCTGCTAATGTCAATGGAGTTTCTGCTCTGTATTTTCTTTACAATGAAAGTTTGAACATATTGTTAGATCCCTTGGGAATTTATATGGGAGAAGCACCGGCATTGCTTGTTGATGACCTGCAGGATGGGGCTCAGAATGACCGTGAATTGAAAAACGGAGCTTGCAAAGCGACTGCTACCGTTGGTGATAAGACGTACGTCATTGGTGGAGCTGATGATGGAATTTTGTCCATTGAAGTTCAAATTTTTGACCGTAATCGTGGAGAATGGGTTCGCCCCACTGTGAGGGGCATCAAACCCATCTGGAGCAAAGGTCTTTCAGCAGTGCCTTTGGAAGACAAAATACTAATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTTGGCACTCAATATGTTAGGCAGCAGCAAGAATATTTGGGAACTGAGGTGGTTGCATGGAGTAAAGGCGTGGTAGGAAATGCTGAGAAGCCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACATTGATAGCAATGCTTATGAAGGAGTTTCCATCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCAAGAGGTACGGAGAAAGATGGGGTCCATTATCATTTTACTGAAAAGAGTATAATGGAGAAAGAAATCAAAGAGGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGTAATCTCTATGGAACTAGTGTTGAGGCTGTGGAACTGGTAGCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGCTCTCTTGAAGCCATATTCATCTTTGTATGTCCCCCTTCAATGGAGGAGCTGGAGAAGCGTCTTCGTGACCGAGGGACAGAGACTGAAGAGCAGATCCTGAAGCGACTACGTAATGCAGAGGCTGAGATTGAGCAAGGCAAATCTTCTGACATATTTGATTTCATCCTATACAATGACAAACTTGATGAGTCTTATGAGAGACTTAAGAAACTATTGGGACTTGATGATTTTATCGCTACACCTAAATCTGGCCCTGGAGAGATTGATTTACCAATTGACCATTCCGTAACAAAAATTGATAACAAAATCATCATAAACCGCATCTCCTCAGGAGAGAAGGAAGCAAAGAATTTGATCATATTAGATGTTTCCTCACTAAATGGAGGTGCACCTGGACGAACAAGAGGCCTAAATTTCCAAGCCATTGGCTCGTTCTCAAATGGCTTGACCGGGATAGAGGATCTTAGCTAA 1284 0.4283 MSANVNGVSALYFLYNESLNILLDPLGIYMGEAPALLVDDLQDGAQNDRELKNGACKATATVGDKTYVIGGADDGILSIEVQIFDRNRGEWVRPTVRGIKPIWSKGLSAVPLEDKILILKKGSKPDDQIWFLEVGTQYVRQQQEYLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLIAMLMKEFPSMFGFSVSHTTRAPRGTEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAEAEIEQGKSSDIFDFILYNDKLDESYERLKKLLGLDDFIATPKSGPGEIDLPIDHSVTKIDNKIIINRISSGEKEAKNLIILDVSSLNGGAPGRTRGLNFQAIGSFSNGLTGIEDLS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03373 427 Hamap Guanylate kinase [gmk]. 160 347 IPR017665 GO:0004385|GO:0006163
Spst1g03373 427 PANTHER GUANYLATE KINASE-RELATED 60 358 - -
Spst1g03373 427 FunFam Guanylate kinase 2 155 347 - -
Spst1g03373 427 SUPERFAMILY Galactose oxidase, central domain 58 141 IPR011043 -
Spst1g03373 427 CDD GMPK 164 340 - -
Spst1g03373 427 ProSitePatterns Guanylate kinase-like signature. 197 214 IPR020590 -
Spst1g03373 427 ProSiteProfiles Guanylate kinase-like domain profile. 162 344 IPR008144 -
Spst1g03373 427 Gene3D - 158 346 IPR027417 -
Spst1g03373 427 Pfam Guanylate kinase 162 343 IPR008145 -
Spst1g03373 427 SMART gk_7 161 347 IPR008145 -
Spst1g03373 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 343 IPR027417 -
Spst1g03373 427 Coils Coil 300 320 - -
Spst1g03373 427 NCBIfam guanylate kinase 163 343 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03373 Spst-Chr1 42323568 42325858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03373 K00942 - gmx:100808931 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03373 1 42323568 42325858 Spst1g03373 1 42323568 42325858 ECH
Spst1g03373 1 42323568 42325858 Spst7g00318 7 2478632 2485052 PCT