Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00252 ATGGGGGGGGGTGGCCGAAGCTCTGCTCCGAAAGAGAAAAACCCACGGGACGACCACGTTTCAAAGAAGCGCGTTCCACACGCAAAACCACCGTTCAGTCTCAGCCAAGTGAAGAAGGCCATTCCGCCGCACTGTTTCCAGCGTTCGGTGCTTCGTTCGTTCTCCTACGTCTTCTACGACCTCGCCATAGCCTCATGTCTTGTTTACCTCGCGCTAAATTACTTCTCTACCCTTCCCCACAACCTCTTACTCTTGGCCTGGCCCCTCTACTGGGTCATCCAAGGTTCCGTCCTCACCGGCGTTTGGGTCATTGCGCACGAGTGTGGCCACCACGCTTTCAGCGACTACCAATGGCTCGATGACTCGGTTGGTCTCGTTCTCCATTCGTTTCTCCTCGTGCCCTATTTTTCGTGGAAATATAGCCACCGCCGCCACCACTCCAACACGGGGTCCCTTGAACGCGACGAAGTGTTTGTGCCGAAAACAAAGGCGAGCATTCGTTGGTATTCTAAGTACCTCAACAACCCTTTTGGGAGAGTTCTCACTCTTGTTATTACCCTAACCCTAGGTTGGCCTCTCTACTTGGCCTTCAACGTTTCGGGTAGGAACTACGAGCGTTTCGCGTGCCACTATGACCCTTATGGCCCCATTTACTCAGATCGTGAAAGGTTTCAGATTTACGTCTCCGATGCCGCGATTCTCGCCGTGTGCTATGGCCTCTACAAGCTTGTCTTGGCCAAAGGGTTGGTTTGGGTGGTTTGTGTTTATGGGGTGCCTTTGATGGTGGTAAATGGGTTATTGGTGCTGATCACTTTCTTGCAGCACACTCACCCTGCGGTCCCTCACTACGATTCCTCGGAGTGGGATTGGTTAAGAGGTGCATTGGCCACTGTGGACAGAGATTACGGGATTCTGAACAAGGTTCTTCATAACATCACTGATACACACGTGGCTCATCACTTGTTCTCCACGATGCCGCATTACCATGCAATGGAAGCCACCAAGGCTATAAAACCTGTTTTGGGAGACTACTATCACTTTGATGGGACTCCTATCTATAAGGCAATGTGGAGAGAGACAAGAGAGTGCATGTTCGTTGAGACTGACGAAGATTCTCAGGCCAAAGGTGTTTACTGGTACAACAATAAGCTTGAATGA 1158 0.5104 MGGGGRSSAPKEKNPRDDHVSKKRVPHAKPPFSLSQVKKAIPPHCFQRSVLRSFSYVFYDLAIASCLVYLALNYFSTLPHNLLLLAWPLYWVIQGSVLTGVWVIAHECGHHAFSDYQWLDDSVGLVLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKASIRWYSKYLNNPFGRVLTLVITLTLGWPLYLAFNVSGRNYERFACHYDPYGPIYSDRERFQIYVSDAAILAVCYGLYKLVLAKGLVWVVCVYGVPLMVVNGLLVLITFLQHTHPAVPHYDSSEWDWLRGALATVDRDYGILNKVLHNITDTHVAHHLFSTMPHYHAMEATKAIKPVLGDYYHFDGTPIYKAMWRETRECMFVETDEDSQAKGVYWYNNKLE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00252 385 CDD Delta12-FADS-like 48 330 - -
Spst7g00252 385 MobiDBLite consensus disorder prediction 1 29 - -
Spst7g00252 385 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 9 383 IPR012171 GO:0016491
Spst7g00252 385 Pfam Domain of unknown function (DUF3474) 23 66 IPR021863 GO:0016717
Spst7g00252 385 MobiDBLite consensus disorder prediction 10 25 - -
Spst7g00252 385 Pfam Fatty acid desaturase 86 346 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00252 Spst-Chr7 1940244 1941401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00252 1 384 Lipid Metabolism Gene Families AT3G12120 72.135 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00252 K10256 - gmx:100780912 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00252 7 1940244 1941401 Spst7g00252 7 1940244 1941401 ECH
Spst1g03306 1 41649705 41651131 Spst7g00252 7 1940244 1941401 PCT