Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00244 ATGACCATACATTATGTCACAACCGTAGAGGATAGCTTGTCACCTCTGCAATCACATATTAAAGTGCTTCAGCTCTTGGCAACTTGCTTCTTCTTCTTCTTCCACTTCCTCTGCTTTTGTTTTTCGACTTTCGAAACCTCGTACAAATCCAGGGCTCTTCGCTTCTGTTTCAATCTCCTTATGGATTCTTCTTCTGATCACCCTCCCTCGTCATCTCTTCGTTCTACTGAAGATGTTCAAAAGGTTAAGTTCTGTCAGTGGTGTGGTGGTTCAACAAAGCATGGAATACCTGAAGGAGAAGAAAGGTTGAGAGCTATATGTACCAGTTGTGGGAATATTGCCTATCAGAACCCAAAAATGGTAGTCGGTTGCCTCATTGAACACGATAACAAGGTCCTCCTTTGCAAGCGGAAGATTGAACCATCTTATGGCCTATGGACACTTCCCGCTGGTTATCTGGAAATTGGAGAGTCAGCTATGGAAGGTGCTATCAGGGAAACAAGGGAGGAAGCCAATGCTGATGTGGAAGTGATTTCGCCCTTTGCTCAATTAGATATTCCTTTAATTGGCCAAACTTATATAATCTTCTTAGCAAGGTTGAAGAGCCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGCCAGCTTTTCTCACTCAATGAAATACCATTCAGCTCTCTATCCTTTTCATCAATGGTGGTTACTTTAAGTTTGTATGTTGAAGATTTAAAGGCAGGAGGAAAACCTAAATTTCATTATGGTACTATTAACAAGAGGCCTGGAACTAGTGCTTCTGATATTAATGCCTATACACTGGATCATCACATGCAATCATGA 837 0.417 MTIHYVTTVEDSLSPLQSHIKVLQLLATCFFFFFHFLCFCFSTFETSYKSRALRFCFNLLMDSSSDHPPSSSLRSTEDVQKVKFCQWCGGSTKHGIPEGEERLRAICTSCGNIAYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGYLEIGESAMEGAIRETREEANADVEVISPFAQLDIPLIGQTYIIFLARLKSPHFSPGPESSECQLFSLNEIPFSSLSFSSMVVTLSLYVEDLKAGGKPKFHYGTINKRPGTSASDINAYTLDHHMQS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00244 278 Pfam Nudix N-terminal 83 116 IPR029401 -
Spst7g00244 278 ProSiteProfiles Nudix hydrolase domain profile. 117 240 IPR000086 -
Spst7g00244 278 Pfam NUDIX domain 121 222 IPR000086 -
Spst7g00244 278 SUPERFAMILY Nudix 83 246 IPR015797 -
Spst7g00244 278 Gene3D - 80 116 - -
Spst7g00244 278 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 117 269 - -
Spst7g00244 278 ProSitePatterns Nudix box signature. 151 172 IPR020084 GO:0016787
Spst7g00244 278 PANTHER NUDIX HYDROLASE 23 84 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00244 Spst-Chr7 1883097 1887148 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00244 K18453 - gmx:100777180 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00244 7 1883097 1887148 Spst7g00244 7 1883097 1887148 ECH
Spst1g03299 1 41560150 41568439 Spst7g00244 7 1883097 1887148 PCT