Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00241 ATGAGGATCCGCAAGAGGCAAGTGCCTTTCCCTCTCTTGCCCGTGAATCACTCAGATCCCAACTTGATCAACCAGTCACCGGTGATGGTGCAACTCAGCCATGCCACCACCACCTCACTCCACCCTTCTTGCACTTTTGGTCCGGCTGCTGCACCCTCACTCCACTTGGATCCTCTTCAGCCGTCTGATCAGCCTCTCTCACCGATCGGAAAACCCACCAACGGCTCTGATGAGTCATCCGGAGAAAAAGGGACCCAGAACTTGAACCTGCTGCAGAAGAAGCAAGAAGACTCTTCGGTGGAAGATGAGAGAAGGGAAGAACAAGGAGGGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCAAATCGTGTTCTGAGACAGTTTCATCTTCAAGCTCTCTTAAACAAGATGGGAGATGGAGCGAGGGAGATAAAGCTTTCCCACCCAAGAAACGAAGAGGGACCTTCGAGAGTGCAACAGAGGATACCAGCAGCGATGATGATAATGATAAGAAGAATTCCAAGAGGAGGATGAAGATGAAGAGAACGAAGGCAAAGATGATCAGGAAGTATTCGAGGCGAGGTGATAGTAACCAAGCAGGAGGGGAAGAAGTAGAGGATGAGAACGAAGAAGAGGTAACAAGAGAAGCGAAACCTCAAGTGCAGGTCGGTAAGAAGAGGGTAAGGGGTGGTGCATTAATGGAAGGTTCAAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGGTGTTGTCAACAAACCTTGGTGGGTTACTCTCTCTGCGAGCATCACTTGGGGAAGGGAAGGTTGAGAAGCATGACAAGTGTGAGAAACAAGTCCATTGGCACAAGCAAATCTAGCGGTGCATTAAAGAGCAAAATGCCAAAATCTGAGCCTTCATTAACAACAAAGTCTAGCACTGTCACTGAAGACCCTTTGGGTGATGATGCTGAAAACATCGATGAGAAGAAGCCAGTGATGGTCACAAAGAGGAGGATGAAGCTTGGAATGGTGAAAGCTCGATCCATAAGCAGCTTGCTGGGACAAACCAACACTGAAGTTGTTGCCATAGCTGAGGACAATGATATGGATGAGATTCTTGAGGATGGAGATGGTTTGGATGGAGACTCCCAACACCATTCCACAAGAGCCATGACCTCCAACCAGTTGCTTGGGGGTGCCCACAACCTTGATTAG 1194 0.4891 MRIRKRQVPFPLLPVNHSDPNLINQSPVMVQLSHATTTSLHPSCTFGPAAAPSLHLDPLQPSDQPLSPIGKPTNGSDESSGEKGTQNLNLLQKKQEDSSVEDERREEQGGGQKGNDTRKGSKSCSETVSSSSSLKQDGRWSEGDKAFPPKKRRGTFESATEDTSSDDDNDKKNSKRRMKMKRTKAKMIRKYSRRGDSNQAGGEEVEDENEEEVTREAKPQVQVGKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTSKSSGALKSKMPKSEPSLTTKSSTVTEDPLGDDAENIDEKKPVMVTKRRMKLGMVKARSISSLLGQTNTEVVAIAEDNDMDEILEDGDGLDGDSQHHSTRAMTSNQLLGGAHNLD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00241 397 MobiDBLite consensus disorder prediction 277 317 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 138 174 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 365 397 - -
Spst7g00241 397 Pfam WRC 235 275 IPR014977 -
Spst7g00241 397 PANTHER EXPRESSED PROTEIN-RELATED 105 346 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 277 311 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 66 94 - -
Spst7g00241 397 ProSiteProfiles WRC domain profile. 233 277 IPR014977 -
Spst7g00241 397 MobiDBLite consensus disorder prediction 51 229 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 95 113 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 175 189 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 378 397 - -
Spst7g00241 397 MobiDBLite consensus disorder prediction 114 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00241 Spst-Chr7 1855975 1862394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00241 - - gmx:102665471 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00241 7 1855975 1862394 Spst7g00241 7 1855975 1862394 ECH
Spst1g03293 1 41500003 41501903 Spst7g00241 7 1855975 1862394 PCT