Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03293 ATGAGGATCCGGAAAAGGCCGGTGCTTTTCCCGTCTTCGGTCTCGCCGTTGCCTCTGTCAGATCCCCACCTGATCAGCCGGTCGCCGGTGGTGGTGCAACTAAGCGACGCTGCTTCCACCGCAGGGAAACATTCTTCTCCTTCTTCTGCAGTGCTCCCTCGCCATGCTGCTTCGTGGAGCTCGGATCGTTGGCAGCCATCTGATCAGCCTCTCCCTTCGATCGGGAAGCCTAACAACGGCTGGGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGACGAGGTTGTTAGAAGGGAAGAGAGTGGAGAAGACTCCGGAGAGAAGGGTAATCATACCAGGAAAGGACGCAACTTTGGTTTGGAAACACTAGCTGGGGTGTTGCCACCGCTAAGCCCTTCTTCTGTTCAAGATGGAAGATGGTACGAGGGAGAGAAAACTATTCCGCTGAAGAAAAGGAGAGGGGCATTCGAGGAGAATAATATTGCTGCTCCTGATAGCAAGAAGATGAAGGCCAAGATGAAAACAAAGATGAACAAAAAGTGTTCCTCGCGCAACGAGGATAGCATGGAAGAGGAATATGAAGAAGAAGAGAAGGGAGAAGAAACAAAACTGGATGTAAACGTGAATGTGATTGTGAGTAAGAAGAGAGCAAGGGGTAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGGGGATGGAGGTGTTGTCAGCAAACGCTGGTTGGTTACTCGCTGTGTGAGCATCACTTGGGGAAGGGAAGACTCAGAAGCATGACTAGTGTTAGAAGCCGTTCCATTGCATCCACTGCACCAAAGAAGGTGCACATTCACCACCCTTCTTCTTCTTCTTCTCTTGAGAAGCAAAATATGAGTGTTGGTGATCCTTTGGGAGAGGAAGAGAAGAAGCCAGAGATAATCACTAAGAAGAGGATGAAGCTTGGCGTAGTGAAAGCGCGTTCCATAAGCAGCTTGCTAGGACAAACAAACACCCACATTGCTGCTGTAGCTCATGAGAATAGCAAGTAA 1065 0.5005 MRIRKRPVLFPSSVSPLPLSDPHLISRSPVVVQLSDAASTAGKHSSPSSAVLPRHAASWSSDRWQPSDQPLPSIGKPNNGWDDPSGIGESGAHRQHNKQDPLDEVVRREESGEDSGEKGNHTRKGRNFGLETLAGVLPPLSPSSVQDGRWYEGEKTIPLKKRRGAFEENNIAAPDSKKMKAKMKTKMNKKCSSRNEDSMEEEYEEEEKGEETKLDVNVNVIVSKKRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAPKKVHIHHPSSSSSLEKQNMSVGDPLGEEEKKPEIITKKRMKLGVVKARSISSLLGQTNTHIAAVAHENSK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03293 354 MobiDBLite consensus disorder prediction 93 125 - -
Spst1g03293 354 MobiDBLite consensus disorder prediction 288 303 - -
Spst1g03293 354 MobiDBLite consensus disorder prediction 178 208 - -
Spst1g03293 354 MobiDBLite consensus disorder prediction 279 318 - -
Spst1g03293 354 Pfam WRC 234 274 IPR014977 -
Spst1g03293 354 MobiDBLite consensus disorder prediction 32 74 - -
Spst1g03293 354 ProSiteProfiles WRC domain profile. 232 276 IPR014977 -
Spst1g03293 354 PANTHER EXPRESSED PROTEIN-RELATED 33 338 - -
Spst1g03293 354 MobiDBLite consensus disorder prediction 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03293 Spst-Chr1 41500003 41501903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03293 - - gmx:100810559 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03293 1 41500003 41501903 Spst1g03293 1 41500003 41501903 ECH
Spst1g03293 1 41500003 41501903 Spst7g00241 7 1855975 1862394 PCT