Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00226 ATGGCCATTTCCTTCTCAACATTCCTTTCTTCTACCCTCCTCTTCTTCCTTTTCTCCTCTCTCACCACCGCTAAAACGCAGCGTTTCGCGCGAGTCATTTCCCCTTCTTCGCTGGGCCTCGACCAGCCGCAGAAGCTCACCCACCTCCACTTCTTCTTCCACGACGTCGTCGGCGGTCGCAACCAGACCGCCGAGCGGGTCGCGGCGTCGCCAGCCACCAACAAGTCCCCGACGATGTTCGGCGCGGTGGTCATGATGGACGACCCGCTCACGTTGCGCCCGGACGCTGCCTCCACGCTGGTCGGGAGGGCGCAGGGGATCTACGCGTCGGCGTCGAGAACCGAGCTGGGGTTACTGATGGCCATGAACTTCGCGTTCACCCAGGGAAAGTACAACGGGAGCAGCCTGGCCGTGCTGGGGCGGAACACGGTGGAATCCACCGTGAGGGAGATGCCGGTGGTGGGCGGCAGCGGACTGTTCCGGTTCGCCCGCGGGTATGCGCAGGCCAAGACGCATTCTTTTGGTATGTTGGAAGCTATTGTGGAGTATAACGTTTATGTGTTCCATTATTGA 573 0.6056 MAISFSTFLSSTLLFFLFSSLTTAKTQRFARVISPSSLGLDQPQKLTHLHFFFHDVVGGRNQTAERVAASPATNKSPTMFGAVVMMDDPLTLRPDAASTLVGRAQGIYASASRTELGLLMAMNFAFTQGKYNGSSLAVLGRNTVESTVREMPVVGGSGLFRFARGYAQAKTHSFGMLEAIVEYNVYVFHY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00226 190 Gene3D - 34 187 IPR044859 -
Spst7g00226 190 PANTHER NUCLEOPORIN-RELATED 31 186 IPR004265 -
Spst7g00226 190 Pfam Dirigent-like protein 47 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00226 Spst-Chr7 1693322 1693894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00226 - - gmx:100798988 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00226 7 1693322 1693894 Spst7g00226 7 1693322 1693894 ECH
Spst1g03269 1 41192642 41193220 Spst7g00226 7 1693322 1693894 PCT