Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03269 ATGGCCAACCCCAAAAGCCTCACATCCATTTTCACCTCCGTCGTTCTCACCCTCCTCTTCTCATTCGCCACCGCAAAATCCCCTCCTTTCCACCGGAGCGTGTCTGCAACGTCTTTGGGCCTCAAGAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCACGACATTGTAAGCGGCCCGAAGCCCACCGCTGTTAAAGTGGCCGAGGCCCACTCCACCAACACTTCCTCCACGCTTTTCGGAAGCATAGCGATGGTCGACGACCCATTGACCGTTGGCCCCGAACCCGGATCCAAACTCGTCGGCAAGGCCCAAGGAATATACGGATCTGCGGCCCAATACGAAACGGGCCTGTTGATGGTAATGAACTTTGTGTTCACGGAAGGGAAATTCAATGGCAGCACGCTGAGCATGCTGGGGCGGAATGCGGTGTTCTCCGCCGTGAGGGAAATGCCAATAGTTGGAGGAAGCGGGGCTTTCCGGTTCGCACGTGGGTATGCTCAGGCCAAGACTCACACGTTTGATCTAAATAGTGGGGATGCTGTTGTGGAGTACAATGTCTACGTGTTCCATTATTAA 579 0.544 MANPKSLTSIFTSVVLTLLFSFATAKSPPFHRSVSATSLGLKKEKLSHLHFFFHDIVSGPKPTAVKVAEAHSTNTSSTLFGSIAMVDDPLTVGPEPGSKLVGKAQGIYGSAAQYETGLLMVMNFVFTEGKFNGSTLSMLGRNAVFSAVREMPIVGGSGAFRFARGYAQAKTHTFDLNSGDAVVEYNVYVFHY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03269 192 PANTHER NUCLEOPORIN-RELATED 32 188 IPR004265 -
Spst1g03269 192 Pfam Dirigent-like protein 47 190 IPR004265 -
Spst1g03269 192 Gene3D - 33 185 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03269 Spst-Chr1 41192642 41193220 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03269 - - gmx:100816095 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03269 1 41192642 41193220 Spst1g03269 1 41192642 41193220 ECH
Spst1g03269 1 41192642 41193220 Spst7g00226 7 1693322 1693894 PCT