Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00208 ATGGAGAATAAGAACACAAAAGATAAGATATTTGAGAAGTTTACATGGACGATTAGGGACTTCTCTAAATTGGACTCCAACGGGCAATACTCTGAAATTTTTTCCATTGATGACCATTTATGGCGGGTTCTGATTTTTCCAAAAGGAAACAATGTGGAATACTTGTCAATTTATTTAGATGGTGGTGGGAATGTGGCAAATTTGGAAACTGAACACCAATTCAATGCAAAAGAGATTAATTGGGGTTTCACCCGATTCATACCTTTAGATGAACTTTGTAACCCTAGCAATGGGTTTATTGTGAATGATACTTGCATAATTGAAGTTGAGATTTTGGTGAGCAATTCAAAACACAATAATGAAGGAGATCAAGAAGACAACAAGATTAATGATAAGCAAACCAATCATATTGATAATCCATTACCTAAGGAAATAGTCAAGTTCAGGGGTTTAGAGAAAATGGAAGAAGATTTTATTCCACTATTAGAAGAAGTATGTTCCCAACATCCATCACTTGTTGATAGGCAAAAGAAGAGAACCCTTATGTATGTTGAATGGGCATTCACAGCTTTAGGTAGAGTTCTACATTTTCTCAAGACTAAAAAGGTGAAAGATATGGATGATGATGCTTGTAATCATCTCCAAGTTTTATGGGAGGAACTTGAGACATTCAAATTTGATTTGACTTGGTTGGAACCCCATGTTCAATCAGCCTTGGGCATGAAAAATTATAGGGAGAGAAGTATTCAAGTGAAAAAAATGAAGGAGAAGGTGTCTTTTTTAGAGACGGAAACAAAGATGCTGAAGGAAAAGATGATGCAAGCAAAGATAAATCTTGAAATAACAAGAAGAGAATTGGCCAGAATAATTGAAGGCTTTGAAGAATGCAATTTGGAAGATGGATTAGGATATGGAGGACAATAG 924 0.3528 MENKNTKDKIFEKFTWTIRDFSKLDSNGQYSEIFSIDDHLWRVLIFPKGNNVEYLSIYLDGGGNVANLETEHQFNAKEINWGFTRFIPLDELCNPSNGFIVNDTCIIEVEILVSNSKHNNEGDQEDNKINDKQTNHIDNPLPKEIVKFRGLEKMEEDFIPLLEEVCSQHPSLVDRQKKRTLMYVEWAFTALGRVLHFLKTKKVKDMDDDACNHLQVLWEELETFKFDLTWLEPHVQSALGMKNYRERSIQVKKMKEKVSFLETETKMLKEKMMQAKINLEITRRELARIIEGFEECNLEDGLGYGGQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00208 307 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 64 IPR008974 GO:0005515
Spst7g00208 307 ProSiteProfiles MATH/TRAF domain profile. 11 111 IPR002083 GO:0005515
Spst7g00208 307 SMART math_3 13 92 IPR002083 GO:0005515
Spst7g00208 307 SUPERFAMILY TRAF domain-like 13 117 - -
Spst7g00208 307 Coils Coil 251 285 - -
Spst7g00208 307 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 65 135 IPR008974 GO:0005515
Spst7g00208 307 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 278 - -
Spst7g00208 307 CDD MATH 13 111 IPR002083 GO:0005515
Spst7g00208 307 Pfam MATH domain 69 112 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00208 Spst-Chr7 1519384 1520641 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00208 - - gmx:121172949 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00208 7 1519384 1520641 Spst1g02613 1 34620507 34621904 PCT