Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00200 ATGGCTTCGGAATTAGTCCCATCTTCCAGGGATTTGTTGAAATGTTGCAATTGTGGATGTGATTGCTCCATGTTAGCTCAATCTTCGGGGACTTGGATTCGATCTGTTAAACGGAAGCATGATGAGTTCAAAATGGATGGCCAACTGGCCATGCCCGCCTTTGCACGGGTTGAAATTGGGAATGAATGTGTTGCCCTGCGTGAGATGGTCAGTATGCAGCAGCAAACCATTCAAGATTTGAATGCAGAGTTGGAGGAGGAGAGAAATTCTTCATCAACGGCTGCGAATGAGGCCATGTCCATGATGTTGAGGCTGCAGAGGGAAAAGGCAGAGGTTCAAATGGAGGCACGCCAATTCAAGCGTTTTGCTGAGGAGAAGATGACACACGATCAGGAGGAGCTTCTATCTTTGGAAGATTTGTTGTATAAGAGGGAACAGATCATTCAGTCACTTACTTGTGAAGTTCAGGCTTACAAACACAGGTTGATGAGTTTTGGTCTTACTGAGGAAGAGGCCGAGGGTGATCAATATGAACTTCCACCCTATGAATATCCTCCTTTGAAATGTAGTGTGGTGCATGGTGCTATGGATGCTGATAATTATGACACGGATGTAGAGAAATATGCTTTTGGTGAATCTCCAACTGACCGATTGAAAAACTTGGAAAATAGGATTTCTCAAATGGAGAAAACTCCCACTTATAGCCAGATGGAAGGGGATTTTACAGGGAAAAATGTTCTAGAGAAAGTGATTGTTGGACAGTCTCCAAGAATGAATAAGCATTCTAGTAGACTTTCCTGTGACTCAACATCATTTGATGGGATGGTTAAAGAAGCAGGGCCCGAATCTATGATTGATTCTCCCAATCTCAATAATAACCATAAGAGAGATTATTTCTCAAAGTCAGAGGATCCCTCCAAGGTAGATAATGAATCAGAAGGTGAAGATGTGAATGACAGAATTTATACAATTGATTCTGTTCATTGTGAGTCACCATATAATGGTTTAAGAGATTCCAAAGCTGGAGCTGTTGATTTCGAAGAGCGTGTTACCACTCCAAAGGAGTCAGGGAATCATGCTACTGATTTTGAGGATCCCTACGTCAAGAAGCTTTACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACAGATAAAGCACAACTGGTGTTACTGAAGGAAATTGCTCAACATCTGTGCAAAGAGATGTCCCCGCGAAGAAAAATGGCAAGGAAACCGAGTTTTGCTGGCAACTCTTCAGTATTTTCAATTTTTAAGTGGGTCTCTTCAATTGTTTTCTGGAGAAAGAGAGCTCATCCAAGCAAGTATATGTTTGGTCTACCACCTGAAAGTGTTGGCTTGCTGATGCTTCTGGACAAGGGAAAACGAACAAGGCCATGGAGATGCGTTTCAAGTACACAAGTGGGGGATTAA 1464 0.4276 MASELVPSSRDLLKCCNCGCDCSMLAQSSGTWIRSVKRKHDEFKMDGQLAMPAFARVEIGNECVALREMVSMQQQTIQDLNAELEEERNSSSTAANEAMSMMLRLQREKAEVQMEARQFKRFAEEKMTHDQEELLSLEDLLYKREQIIQSLTCEVQAYKHRLMSFGLTEEEAEGDQYELPPYEYPPLKCSVVHGAMDADNYDTDVEKYAFGESPTDRLKNLENRISQMEKTPTYSQMEGDFTGKNVLEKVIVGQSPRMNKHSSRLSCDSTSFDGMVKEAGPESMIDSPNLNNNHKRDYFSKSEDPSKVDNESEGEDVNDRIYTIDSVHCESPYNGLRDSKAGAVDFEERVTTPKESGNHATDFEDPYVKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKEMSPRRKMARKPSFAGNSSVFSIFKWVSSIVFWRKRAHPSKYMFGLPPESVGLLMLLDKGKRTRPWRCVSSTQVGD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00200 487 Coils Coil 368 395 - -
Spst7g00200 487 PANTHER BNAANNG28530D PROTEIN 60 425 - -
Spst7g00200 487 Pfam Zein-binding 65 155 IPR007656 -
Spst7g00200 487 MobiDBLite consensus disorder prediction 281 315 - -
Spst7g00200 487 Coils Coil 70 115 - -
Spst7g00200 487 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Spst7g00200 487 MobiDBLite consensus disorder prediction 296 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00200 Spst-Chr7 1481553 1485015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00200 - - gmx:100806435 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00200 7 1481553 1485015 Spst7g00200 7 1481553 1485015 ECH
Spst1g02625 1 34715831 34718013 Spst7g00200 7 1481553 1485015 PCT