Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02625 ATGGATTTGGAATCTTCTGGCGATTCGGGGAAATGTTGCAAGCACTGCGAATGTGGGTGTAGGGATTGCTCCATGGCAGCTCAATCCTCAGGGAATTGGTCTCGTTCTGTGAAAAGGAAACACAAGGAGTTGGAACGGGGCGGCCAATTCTTTGTGCCAGGGGTGGATTGCGATTCAGTGGCACGTGTGGATATTGGGAATGAATGTGAAGCCCTACGGGAGGCTGTGAGCAGCCAACAACAATCAATACAGGAATTGTATGCTGAATTGGAGGAGGAGAGGAGTGCTGCATCCTCGGCCGCAAATGAGACCATGTCAATGATATTGAGGTTGCAGAGGGAGAAAGCAGAGCTTCAGATGGAGGCGCGGCAGTTCAAGAGATTTGTGGAGGAGAGAACGGTTCATGATCAGCAGGAGCTTTTATTGTTGGAGGATATGTTGTATAAGAAAGAACAGGCAATTCACTCGCTCACCTGTGAGGTACAGGCTTATAAACACAGGTTGATGAGTTTTGGCCTCACTGAATCGGAGGCAGAAGGTGATCGGGATGAATTTCTCCCTTATGAGTACCCTCCTTTGAGATGTAAAGCAATCCATGCTTGTGCTGATGCGGACAATGATGACATAGACATTGATAAATATGCTTTTGGCGAAACTCCTAAGGACCGATTGAGGAACTTGGAAAGCAGGATATCTCAAATGGAGAGAAGCCCCACTTACAGCCAGATGGATGGGGATTTCAATGGAAAAAATGTTCTAGAGAAGGTGATAATTGGACAGTCTCCAAGATGGACTAAGCATTCCAGGAAATTTTCTTGTGATTCATCTTCATTGTGTCCTGAGTATATGATGGATTCTCCCAGCTTAAGGAGGATAGATTGTCCCTCACAATCGGAGGACCTTCCCAACTTGAAGAAGATGGATAATGTATCTGAAGCTGGTGATGATATGATTGATAAAGTCTATACAATTGACTCCGAGTTCAAAACTGGAGTTAATGTTTACGATTATTATTCAAGCACTCCAAAGGACTTTGTTAATAATGCGGAATTTGAAGATCCATATGTAAAGAAGCTTTACATGAGGCTTCAAGCACTTGAGGCTGATAGGGAGTCAATGAGGCAGGCACTCATTTCAATGCGCACTGATAAAGCACAACTTGTTTTACTGAGAGAAATAGCTCAAGAATTGTGCAAAGAGATGTCGGAGCAAAAAAGAATGACTGCAAGGTCCTTTATTGGCAGCTTCTCATTCTTGACCATTTTTAAGTGGATTGCTTCAATTGTTTTCTGGAGAAAGAAAGCTCAGCAAATCAAGTATATGCTCGGGCTACCATCTGACAGCGGGGGCTTGCTAATGCTGCTTGACAAAGGACCCCATGTAAGGTCATGGAGATATCTTCATAGTACACAAATGGGAGAGTAG 1425 0.4407 MDLESSGDSGKCCKHCECGCRDCSMAAQSSGNWSRSVKRKHKELERGGQFFVPGVDCDSVARVDIGNECEALREAVSSQQQSIQELYAELEEERSAASSAANETMSMILRLQREKAELQMEARQFKRFVEERTVHDQQELLLLEDMLYKKEQAIHSLTCEVQAYKHRLMSFGLTESEAEGDRDEFLPYEYPPLRCKAIHACADADNDDIDIDKYAFGETPKDRLRNLESRISQMERSPTYSQMDGDFNGKNVLEKVIIGQSPRWTKHSRKFSCDSSSLCPEYMMDSPSLRRIDCPSQSEDLPNLKKMDNVSEAGDDMIDKVYTIDSEFKTGVNVYDYYSSTPKDFVNNAEFEDPYVKKLYMRLQALEADRESMRQALISMRTDKAQLVLLREIAQELCKEMSEQKRMTARSFIGSFSFLTIFKWIASIVFWRKKAQQIKYMLGLPSDSGGLLMLLDKGPHVRSWRYLHSTQMGE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02625 474 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Spst1g02625 474 Coils Coil 356 383 - -
Spst1g02625 474 PANTHER BNAANNG28530D PROTEIN 65 407 - -
Spst1g02625 474 Coils Coil 69 128 - -
Spst1g02625 474 Pfam Zein-binding 71 161 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02625 Spst-Chr1 34715831 34718013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02625 - - gmx:100797605 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02625 1 34715831 34718013 Spst1g02625 1 34715831 34718013 ECH
Spst1g02625 1 34715831 34718013 Spst7g00200 7 1481553 1485015 PCT