Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00139 ATGCCTACTCCTGCTTCTGCTCTTGTTTTCTCTGTACTCTGTTTCCTCTCTATCATCATCATCATCACTGCATCATCTACACCCAACACCATCAACCTCCCTCTCTCGCCCTTATTCACCACACACCCTTCTTCACACCCATTCCAAACCCTCAAACTCGCCGTTTCAACCTCCATCAAAAGAGCCCACCACCTCAAAAATCACCAACCCAACCAACTCAAAACCCAGATTCACCCCGAAAGCTACGGAGGATACTCCATCGACCTCAATTTCGGAACCCCACCAGAAACCTTCTCCTTTGTTCTCGACACCGGAAGCACCCTCGTCTGGCTCCCATGCTCTTCCCACTACCGATGCTCAAATTGCAACTCCTTCCCCAATACACCCAAATCTTTCATCCCCAAAAACTCTTCTTCCTCTAAGTTTGTGGCCTGCACAAACCCCAAATGCGCGTGGGTCTTCGGCGCCAACGTCGAATCGCATTGTTGCAAACAAAACAGCGCCACCGCCAACTGTTCACAAACATGCCCTGCTTACTCCATCCAATACGGGATGGGCTCAACCGCGGGCTTTCTCCTCTTGGAAAATCTCAACTTTCCCGGGAAAATCCTCCCCGATTTTCTCGTCGGCTGCTCCATCGTCTCTGTCTACCAGCCCGCGGGAATCGCCGGCTTCGGCCGCGGCCCAGACTCCCTTCCGTCGCAGATGAACCTTACTGGATTCTCATACTGCTTACTCTCGCACCAATTCGACGACTCGTCGGAAACCAGCGACCTCGTCTTGCACACTTCCTCCCCCGGCAACGAAAATACCAGCGGCGTCAGCTACACGCCTTTTCAGAAAAACCCTTCCACTAAAAACCCCGCGTTCGGTTCGTACTATTACATCAGTCTCATGAGAATCATCGTTGGGGAGAAGCGCGTGCAGGTTCCGACAAGATTTCTGGAGCCTGACGTTGACGGTAAGGGTGGGTCTATCGTGGACTCGGGGTCCACCTTCACCTTCATGGAGAGGCCAATTTTTTATTTGGTGGCACAGGAGTTCTCGAAGCAGGTGAACTACACGCGCGCCAGGGAGGTTGAGCAAGAATCCGGGTTGAGTCCGTGTTTTGTGGTGTCTGGAACGGCGTCGTTTCCGGAGCTTCGGTTTGAGTTCCTGGGCGGCGCGAAGATGAGGCTACCGCAGACGAATTATTTCTCGTTAGTCGGAAAGCCCGACGTGGCATGTTTGACTATTGTGACCGATGACGTGGCGGGTCCCGGCGTGGCAAGTGGGCCCGCTGTGATATTGGGGAACTATCAGCAGCAGAATTTGTACGTTGAGTATGACTTGCGAAACGAGAGGTTCGGGTTTCGGAGTCAGAACTGCAAAACGCGCGTTTAA 1383 0.5293 MPTPASALVFSVLCFLSIIIIITASSTPNTINLPLSPLFTTHPSSHPFQTLKLAVSTSIKRAHHLKNHQPNQLKTQIHPESYGGYSIDLNFGTPPETFSFVLDTGSTLVWLPCSSHYRCSNCNSFPNTPKSFIPKNSSSSKFVACTNPKCAWVFGANVESHCCKQNSATANCSQTCPAYSIQYGMGSTAGFLLLENLNFPGKILPDFLVGCSIVSVYQPAGIAGFGRGPDSLPSQMNLTGFSYCLLSHQFDDSSETSDLVLHTSSPGNENTSGVSYTPFQKNPSTKNPAFGSYYYISLMRIIVGEKRVQVPTRFLEPDVDGKGGSIVDSGSTFTFMERPIFYLVAQEFSKQVNYTRAREVEQESGLSPCFVVSGTASFPELRFEFLGGAKMRLPQTNYFSLVGKPDVACLTIVTDDVAGPGVASGPAVILGNYQQQNLYVEYDLRNERFGFRSQNCKTRV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00139 460 CDD pepsin_A_like_plant 84 456 IPR034161 -
Spst7g00139 460 Gene3D Acid Proteases 61 259 IPR021109 -
Spst7g00139 460 SUPERFAMILY Acid proteases 81 456 IPR021109 -
Spst7g00139 460 Pfam Xylanase inhibitor C-terminal 294 452 IPR032799 -
Spst7g00139 460 FunFam Aspartic proteinase nepenthesin-2 62 259 - -
Spst7g00139 460 Gene3D Acid Proteases 263 460 IPR021109 -
Spst7g00139 460 FunFam Aspartyl protease family protein 266 459 - -
Spst7g00139 460 MobiDBLite consensus disorder prediction 258 278 - -
Spst7g00139 460 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Spst7g00139 460 ProSiteProfiles Peptidase family A1 domain profile. 85 452 IPR033121 -
Spst7g00139 460 Pfam Xylanase inhibitor N-terminal 85 260 IPR032861 -
Spst7g00139 460 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Spst7g00139 460 PRINTS Pepsin (A1) aspartic protease family signature 428 443 IPR001461 GO:0004190|GO:0006508
Spst7g00139 460 PRINTS Pepsin (A1) aspartic protease family signature 325 336 IPR001461 GO:0004190|GO:0006508
Spst7g00139 460 PANTHER OS07G0603500 PROTEIN-RELATED 40 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00139 Spst-Chr7 1047586 1048968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00139 73 456 Miscellaneous Gene Families AT1G44130 23.601 7.62e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00139 - - gmx:100808552 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00139 7 1047586 1048968 Spst7g00139 7 1047586 1048968 ECH
Spst1g02679 1 35237503 35238903 Spst7g00139 7 1047586 1048968 PCT