Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00108 ATGGTGTTGGAGAAGGCTTTCCTACTATGGTGTAGAGGCCAAGATGAGATTACCATACTGATGAAAGCAGTGACTTGTGCTGTCACTGCACTTTACACACAGGTTTCTTTCTCGGATCCCGAAACAAAGAAACTCACTCACCGTTTTCTCACAGTTTTTCAGCATCCAAGCAAGATCTTGCACATAATCATCAAATTCTCCGCGAGTCCTGTGACTTTTGCAAGTTATGAGTTACAGAAGATTGCAACCCTTGGTACAACAGGAAGGTTGTTTGTTCGGGCCATGGGTTTATATACTGGAAACAATTTGTGGGGAGATAATCGTTCATCCAGATCATCACTGGTAGATGGTTTTGATAGTCTAGAGGAGGGTGGTCTAAGGGCTTCTTCCTCTTACTCACGTGAAATTAATGAGCATGATAATGAAAAAGCCATAGAGAGTTTGCACGACAAAGTTTCCTTTTTGAAACGATTAACAGGTGATATACATGAAGAGGTTGAGAGTCATAACCAGTTGCTTGATCGGGTGGGTAACAAAATGGATGCGTCAAGGGGTATGATGATGGGAACCATGGATCGATTCAAGAAGGTTTTTGAGAAGAAGTCAACGAGGAAGACGTGCACATATGTGGGTTATTTCACAGTTGCCTTCATATTCATATACTATCTTATTAGGTTCATAAACAAGACTAGCATTTACTTTGCAGGATGCTTGGATATTTTACTCTTGGGTAGGCCCGTGTTGCTAAAAGCTCATATGTTTGATCTTCTGATGGATGTTTGGAATGTTGTTTTCCTTGGGAAAAATGAAAACTCAGATGGTTTCACCAAGACCAGAGCTTCATATGTGTGA 852 0.4096 MVLEKAFLLWCRGQDEITILMKAVTCAVTALYTQVSFSDPETKKLTHRFLTVFQHPSKILHIIIKFSASPVTFASYELQKIATLGTTGRLFVRAMGLYTGNNLWGDNRSSRSSLVDGFDSLEEGGLRASSSYSREINEHDNEKAIESLHDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSTRKTCTYVGYFTVAFIFIYYLIRFINKTSIYFAGCLDILLLGRPVLLKAHMFDLLMDVWNVVFLGKNENSDGFTKTRASYV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00108 283 FunFam bet1-like SNARE 1-1 142 206 - -
Spst7g00108 283 SUPERFAMILY SNARE fusion complex 135 197 - -
Spst7g00108 283 CDD SNARE_Bet1 138 196 IPR039899 -
Spst7g00108 283 Gene3D - 143 206 - -
Spst7g00108 283 PANTHER GOLGI SNARE BET1-RELATED 109 225 - -
Spst7g00108 283 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00108 Spst-Chr7 817330 831643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00108 K08504 - gmx:100818014 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03120 1 39750750 39754425 Spst7g00108 7 817330 831643 PCT