Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01697 ATGGAAGCTGCCTATAGCATGCCCTTTGTCTGTTATTCATGCCAAGGCCAAGGTCCAACTACGGTTCCACAAAACTACTATTTTGCCAACCATAATGGTTATAATGCATCTAATTACCCTCCTCCTCCTCCTCCTCCTGCTGCCTATGGATGTAGGACATATAACCAATGCTCTTATCCTCAGCCTTTGCAACTCATGACTCCACCACCACCACCTCCATTGACCCCTCCTTCTTCCTTTGGCAACAAGAGGGCTGTGATAATTGGCATCAGCTATGGCCATCAGACTAACAGTATCAAAGGTTCTCTGAATGACGCTCAGTGCGTGAAGAACTTTCTCATTAGCAAGGCTTTCCCTACTGATTCCATGTGGATCCTCACAGATCACCCGGGGGAGAGAAACCCAATGAGAATTCCGACAAGATATAACATTCGAATGGCAATGAGGTGGTTGGTTGAGGGTTGCAGATCAGGGGACTCGTTGTGGTTTTACTACTCTGGACATGGATCGCAGGAAGAAGACACCGACATGGATGAGCTTGATGGATATGATGAAGCAATATGCCCCGTTGATTACGTGCATGAGGGTAAGATAATTGACGATGAAATCAACGCCACAATCGTTAGGCCTCTCCCCCATGGTGCCAAACTTCATGCCCTTGTTGATACTTGCTTTAGTGGCACAATTCTTGATTTACCATTCATGTGCAGAATGAACCGAAAAGGTCATTATGGCTGGCAAGATCATAGAAATCGCAGAACTTACAAAGGCACCAGAGGAGGGTTAGCAGTTTGCATTTCAGCTTGTGATGATGATGGAAGTGCAGCAGATACATCGGCCTTTAGCGGTGTGGAAAGCACTGGTGCTTTGACTTTCAGTTTCATCCAAGCCATGCAAAATCAATCTAATTTGACTTATGGCAACTTGCTTAATTCCATGCGCTCTACAATCCGTGGGGCTAAAGAGAGAACGTTTGGTCCAACCGATCGACAGTTTTCCATGAACACTCGCCTGCAGTATGTTCATGAGCCACAACTGTCGTCTTCTGAGATGTTTGAAATTTATTCAAAGACAATTGTAATTTGA 1086 0.4521 MEAAYSMPFVCYSCQGQGPTTVPQNYYFANHNGYNASNYPPPPPPPAAYGCRTYNQCSYPQPLQLMTPPPPPPLTPPSSFGNKRAVIIGISYGHQTNSIKGSLNDAQCVKNFLISKAFPTDSMWILTDHPGERNPMRIPTRYNIRMAMRWLVEGCRSGDSLWFYYSGHGSQEEDTDMDELDGYDEAICPVDYVHEGKIIDDEINATIVRPLPHGAKLHALVDTCFSGTILDLPFMCRMNRKGHYGWQDHRNRRTYKGTRGGLAVCISACDDDGSAADTSAFSGVESTGALTFSFIQAMQNQSNLTYGNLLNSMRSTIRGAKERTFGPTDRQFSMNTRLQYVHEPQLSSSEMFEIYSKTIVI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01697 361 SUPERFAMILY Caspase-like 69 194 IPR029030 -
Spst6g01697 361 Gene3D - 60 360 - -
Spst6g01697 361 PANTHER METACASPASE-4 80 355 - -
Spst6g01697 361 Pfam Caspase domain 83 351 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01697 Spst-Chr6 16189647 16191156 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01697 K22684 - gmx:100779288 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00370 3 6544078 6544689 Spst6g01697 6 16189647 16191156 PCT