Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00370 ATGGAAGCTACATCTAAATGCAGAAGGTACAGAAAGGGTGTTTTATCTGCAACAAGTACTTCTATGCATGGTTGCTATGCGTCCAAAAATATATCTAGTTCCCAACCAAATGGGGAAGCAAAAGTTACCTGCAGATGTTGCAAAGAAGAGTGTCACTGCTTAATGCCCTCAAGAACAAACTCACACTTCAGTAATTCAACTTTGGGACCACCTAGTTCAAAGAAAGAATGTGGAATATGCCGTCCAGTGAAACAATTTGGATCCAAATTGTTGAAACTTGGTGATCTAGGAGGTTCAAACAAAGATCGAAATTTGCTGAGTGGGTCATTATCTCCTTCAATGCCCTATTCCTCAGCCTTGCCTAGCACTAGCAGGTATAATAAACGTGCGGTTCTCTGTGGAGTTTCTTACAAAAGAATGAAATTCCGGCTCAGAGGAACCATGAATGACATTAGAAACATGAAGGAACTGCTGATAAAAAATTTTGACTTTCCAAATGAGTGCATACGAATCCTCACAGGTATCTCTATCTGTTTCTGTCAGAAACAGATAGCTGTCCATTTGATGGATTTGACTTATTCAGTTAATCTATATCTTTCAACTTTGTATTAG 612 0.3889 MEATSKCRRYRKGVLSATSTSMHGCYASKNISSSQPNGEAKVTCRCCKEECHCLMPSRTNSHFSNSTLGPPSSKKECGICRPVKQFGSKLLKLGDLGGSNKDRNLLSGSLSPSMPYSSALPSTSRYNKRAVLCGVSYKRMKFRLRGTMNDIRNMKELLIKNFDFPNECIRILTGISICFCQKQIAVHLMDLTYSVNLYLSTLY 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00370 203 Pfam Caspase domain 128 177 IPR011600 GO:0004197|GO:0006508
Spst3g00370 203 Gene3D - 100 176 - -
Spst3g00370 203 PANTHER METACASPASE-4 126 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00370 Spst-Chr3 6544078 6544689 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00370 K22684 - gmx:100796640 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00370 3 6544078 6544689 Spst3g00370 3 6544078 6544689 ECH
Spst3g00370 3 6544078 6544689 Spst6g01697 6 16189647 16191156 PCT