Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01538 ATGGAGGGTGGAGAGGAAGGAGTGGAGATGGTGGTGGACTCAAAGGACTTACAGCAACAGAGCAAAGCGTTGGACAAGCTCACTGACCGCGTCGAGGATCGCCAGCTGGATTCCACGCGCGTCCAAGAGGCTATGGCTTCCATCGCTGCTTCTGCTGAAGCTGATCGCAATGCCATGCGCATCAGGGAGAAAGAATTAGCTGCGGTTAAGATTAATGCAGCAGATGTTGATATAATTGCAAATGAACTAGAGTTGGACAAAAAGGTTGCTGAAAGAACTCTGCGTGAGCACAAAGGTGATGCAGTTGCTGCCATTAGGCACTTGCTTCACTAG 333 0.5015 MEGGEEGVEMVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01538 110 Coils Coil 80 100 - -
Spst6g01538 110 CDD UBA_HYPK 69 109 IPR038922 -
Spst6g01538 110 Gene3D - 70 108 - -
Spst6g01538 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 5 110 - -
Spst6g01538 110 Coils Coil 17 37 - -
Spst6g01538 110 Pfam HYPK UBA domain 69 109 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01538 Spst-Chr6 14435842 14441881 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01538 - - gmx:100527445 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01538 6 14435842 14441881 Spst6g01538 6 14435842 14441881 ECH
Spst3g02948 3 79144845 79146226 Spst6g01538 6 14435842 14441881 PCT