Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01316 ATGAGTTTCAGAGTTAGAGACCAAGAAAGGGACTTTGATTCTCCAAGAGAGGTTGGAGAGATTGACACAAGGGCTCCATTTCAATCTGTTAAAGCAGCTGTTAGTTTATTTGGTGAAGTAGCCGTCTCAAGGGAAAAACGTTCTTTTAAGAGAAGATCCTCATCATCATCATCATCAGAGAATGTTCTGGAAAAGGAGACTCAGCTTCTCTTGGCCCAAAGAGAATTACACAAGATAAAGAAAAAGCTGGATAGTTCTGAGAGCACAAAAACAAAAGCACTTTCCGAGCTTGAAAAGGCCAATGTGACACTACAGGAATTGACAAAGAAGCTCACGAGTGTGAGAGAATCTAAACAATCTGCAATAGAAGCTGCTGAAGTTGTGAAGAATCAAGCCAAAGAACTTGAACAGGCACTATCCCAAAAAGCTATAGGATATGAAGCTTGGAAACAAGAACTAGAGCATGCAAGAAAAGAGTACACAACAACAGTAAAGGAACTAGATGCTTCCAAGCAAGAACTCAACAAAATCAGGCAGGATTTTGACACAGCTTTGGAGGCAAAACTGGCTGCATTCCAAACAGCAGGAGAGGCTCAACGTTCTGCAAAACTGAACTCAGAAAAGCTCCAGGAACTCTCAAACCAAATTGCAACCATGAAAGAACAAATTGATCATTTGAAGCTTGCCTCATCACAAGCCCAAGACGATCAGGCAAATGTCATGAGAGAAAGAGAAGCACGACTAACTTTCTACCAAAATGCCAAGGATGAAGCAGAGAAAAAATTGATTGTTTTGAAGAATGAGTATGACCAGGAACTAACACAAAATCTAGAGGCCAAACTTTCTGAAACAAGTGAAGAGATTCAGGTTCTCCAAGAGCAAATGAAACAGGCACATGATTCAGAGATAGATTCTATGAGACTAATAACTTTGGAGATCAAAGAAGCCACAAAAACACTTCAGGAAGTTGCTGCAGAAGAAACCTCTCTGAGAAACCTAGTGGATTCCCTCAGGACAGAGTTAGAACAAGTGAAGAAAGAGCAACAGGAACTCAAGGAGAAGGAAAAGGCAGCAGAAGCCCTTGCTCTCACCCTAACTGATGAACTACAGAGTGGACCAGAAGTGACAAGGTCTGCGGTGGACAAAGAATCTGAAGAGATAGAATTGAAGATCAAACAGCTGTCATTTGAGACAGGAGCTGCAAGAAGGGAAGAAGAAGAAATGAGAGGCAAAACTCAAGAGCTGAAGCAAGAGGCTGAAAAATCCAAAGCTATGGCAGAAGAATTGGAGAAGAAACTAGAGATTTACCTGAAACAGGCTGAGGAAGCAAAAGCAGCAGAACAAAAAGCCATTGAGGAGATGAAGCTGATGTCTGACAGTAACAACACTCAAGACATAGTCTCAGTTTTAGATTCCAATGGGAAGATTGTGTTGACAGTTGATGAGTTTGCAGCACTGAGTGGGAAAATCAAGGAATCTGAAGATTTGATTGACAGAACAGAAGCAGCATCCATGGCTCAGGTGGAAGCGATCAACTTAAGGAAGAATGAAGTGGACAGAAAAGTGGAGGCAAACCTGAAAGCCATTGAGGAAATAAAGGCTGCAACAGATATGGCTCTTAGAAATGCAGAGATGGCAGATTCTGCAAAGGAAGTAGTTGAGGGCGAACTAAAGAAATGGCGTCTAGAAGAACAAAACTTGGAATACTCAGACAATTCTCCAAGACCAATCCCTCTGCGTATTTAA 1746 0.4158 MSFRVRDQERDFDSPREVGEIDTRAPFQSVKAAVSLFGEVAVSREKRSFKRRSSSSSSSENVLEKETQLLLAQRELHKIKKKLDSSESTKTKALSELEKANVTLQELTKKLTSVRESKQSAIEAAEVVKNQAKELEQALSQKAIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDTALEAKLAAFQTAGEAQRSAKLNSEKLQELSNQIATMKEQIDHLKLASSQAQDDQANVMREREARLTFYQNAKDEAEKKLIVLKNEYDQELTQNLEAKLSETSEEIQVLQEQMKQAHDSEIDSMRLITLEIKEATKTLQEVAAEETSLRNLVDSLRTELEQVKKEQQELKEKEKAAEALALTLTDELQSGPEVTRSAVDKESEEIELKIKQLSFETGAARREEEEMRGKTQELKQEAEKSKAMAEELEKKLEIYLKQAEEAKAAEQKAIEEMKLMSDSNNTQDIVSVLDSNGKIVLTVDEFAALSGKIKESEDLIDRTEAASMAQVEAINLRKNEVDRKVEANLKAIEEIKAATDMALRNAEMADSAKEVVEGELKKWRLEEQNLEYSDNSPRPIPLRI 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01316 581 Coils Coil 306 364 - -
Spst6g01316 581 MobiDBLite consensus disorder prediction 400 423 - -
Spst6g01316 581 Pfam Weak chloroplast movement under blue light 20 565 IPR008545 -
Spst6g01316 581 Coils Coil 401 457 - -
Spst6g01316 581 MobiDBLite consensus disorder prediction 1 20 - -
Spst6g01316 581 Coils Coil 241 301 - -
Spst6g01316 581 Coils Coil 90 142 - -
Spst6g01316 581 Coils Coil 146 187 - -
Spst6g01316 581 Coils Coil 202 236 - -
Spst6g01316 581 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 19 566 - -
Spst6g01316 581 MobiDBLite consensus disorder prediction 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01316 Spst-Chr6 12166289 12168619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01316 - - gmx:100818297 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01316 6 12166289 12168619 Spst6g01316 6 12166289 12168619 ECH
Spst3g03329 3 83120435 83121991 Spst6g01316 6 12166289 12168619 PCT