Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03329 ATGTTTTTTCTTCAAAATTTGCAGAATGTATTTGAAAAGGAGACGCAGCTTATCTTGGCCCAAAAGGAACTAAACAAAATAAAGAAACAAGTGGATAATGCTGAGGCCGACAAAGCCAAAGCACTTTCTGACCTCGAGAGTGCCAAGGAGATACTTAAGGATTTGACAACCAGGCTAACAAACGTAAGAGAATCCAAGCAATCTGCAATGGAAGCAGCTGAAGCCGTGAAAAACCAGGGCAAGCGATTTGAAAAGACACTATCCCTAAAAGCCGTGGGATATGAAGCTTGGAAGAAAGAACTAGAACATGCAAGAAAAGAGTACATCACCACTATAACTGAACTAGATTCTTCCAAGCAAGAACTCACCAAAATAAGGCAGGATTTTGATGCAGTTATGGGGGCTAAGCTGGCAGCATTGCAAGCAGCAGGAGAGGCTCAACGTTCAGCAATATTAAACTCAGAAAGAATCAGCGAACTTTCAAATGAAATTGCAACCATGAAAGCATCAATTGAACAATTGAAGCTCACCTCTGAACAATCCCATGAAGAAAGGGAAGCCCAACTTATGAGTTATTACAAAAATGCCAAGGAAGAAGCACGAAGAAACTTGGAATCCTTAAAGAATGAATATGATCCTGAACTCATGCAAAGTCTAGACGTCAAACTTGTCCAAACAAATGCGGAGATTGAGGCTCTTCAAGAACATATTAAGAAGCTGCACGCTTCTAAGATGGATTCTGTGAGGCTTCTAACTTCAGAGCTTAAAGAAGCCACAAAAACACTTCAGGACATTGCTGAGGAAAAGAACTCCCTTAAGAAATTGGTATTTTTTCTCATGACAGAATTGAAGCAAGTGAGAAATGAGCAAAATGGAGTGAAGGAGAAGGAACATGCAACGGAAGCTCTTGCTGCTAGCCTCACCGTTGAACTGCAAGGAACAATGGGAGAGACAAAACTTGCACCAGGCACTGTGGAGGACTTAGAAGCTGATATCTTCTATATACAAACTAAGAAAATTCAGAAGCTACAATTGGAGACGGAAGGTGCAAGAAGAGAAGCTGAAGAGATAAGGAGAAAAGCTCAAGAGCTGAAGCGAGAAGCTGAAAAGTGCCGGGTTGTGGCAGAAGACGCGGAGCAAAAACTTGAGCTAGTTCTGGTGGAGGCTCAGGAGGCAAAAGCAGCTCACCAAAGAGCCGTTAAAGAGATCAAGATTTTATCTGAAGTGGGTACAGTTCCGAACTCAAAATTCAGTGGTAAGATCAAGATGTCAAGTGAAGAATTTGAGGCAATGAGAGCAAAGGCCAAGGAGTGTGAGGAATTGGTTGTAAAGAAAGAGGCAATTGTGATGGCAGAGCTTCAACAAATCTACGCAAGAAAGAATGAAGTGGACAGAAAGGTGGAAACTAATCTGAAGGCCATTGAGGAAACAAAGGCTGCTACAGAGACGGCTTTGTGGAGTGCAGAGATGGCAGATTCATCAAAAGTAGCAATTGAAACTGAACTGAAGAGGTGGCGTCAACAACATCAAAAAGTGGTACCCGATGTTGCTTCTTAG 1557 0.4213 MFFLQNLQNVFEKETQLILAQKELNKIKKQVDNAEADKAKALSDLESAKEILKDLTTRLTNVRESKQSAMEAAEAVKNQGKRFEKTLSLKAVGYEAWKKELEHARKEYITTITELDSSKQELTKIRQDFDAVMGAKLAALQAAGEAQRSAILNSERISELSNEIATMKASIEQLKLTSEQSHEEREAQLMSYYKNAKEEARRNLESLKNEYDPELMQSLDVKLVQTNAEIEALQEHIKKLHASKMDSVRLLTSELKEATKTLQDIAEEKNSLKKLVFFLMTELKQVRNEQNGVKEKEHATEALAASLTVELQGTMGETKLAPGTVEDLEADIFYIQTKKIQKLQLETEGARREAEEIRRKAQELKREAEKCRVVAEDAEQKLELVLVEAQEAKAAHQRAVKEIKILSEVGTVPNSKFSGKIKMSSEEFEAMRAKAKECEELVVKKEAIVMAELQQIYARKNEVDRKVETNLKAIEETKAATETALWSAEMADSSKVAIETELKRWRQQHQKVVPDVAS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03329 518 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 16 510 - -
Spst3g03329 518 Coils Coil 17 79 - -
Spst3g03329 518 Pfam Weak chloroplast movement under blue light 16 511 IPR008545 -
Spst3g03329 518 Coils Coil 340 395 - -
Spst3g03329 518 Coils Coil 190 243 - -
Spst3g03329 518 Coils Coil 157 177 - -
Spst3g03329 518 Coils Coil 248 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03329 Spst-Chr3 83120435 83121991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03329 - - gmx:100805288 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03329 3 83120435 83121991 Spst6g01316 6 12166289 12168619 PCT