Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01264 ATGAAGGGCCTCTTCAAGCCTAAACCACGCACTCCTGCAGATGTAGTGCGCCAAACCAGAGATCTTCTACTACTTATTGATCGAAACCCCGAAGCCCGCGAAAGCAAACGAGAAGAGAAGCAAATGTCCGAGCTATTTAAAAACATCAGGGAGCTTAAGCAGATCCTGTATGGAAATAGTGAATCTGAACCAGTTGCTGAAGCTTGTGCACAGTTGACTCAGGAGTTCTTTAAGGGGGACACGTTGCGACTGTTTATCAAATGTCTTCCAAAATTGAATTTGGAGGCCAGAAAAGATGCCACGCAAGTTGTTGCAAATTTACAAAGACAACAGGTTCAGTCTAAGTTGATTGCATCTGATTACCTGGAGAAAAATCTGGATCTTATGGACGTCTTGATTGTTGGCTATGAAAACACAGACATGGCTTTGCACTATGGTGCAATGCTAAGGGAGTGCATAAGACATCAGATCGTTGCAAAATATGTTCTCAACTCACCTCAGATGAAGAACTTTTTTGACTATATTCAACTCCCAAATTTTGACGTTGCTGCAGATGCTGCAGCTACCTTTAAGGAGCTCTTGACAAGACATAAATCCACTGTAGCTGAATTCCTTTCCAAGAATTATGAATGGTTTTTTGCAGAATATAACACTAAGCTATTGGAATCTTCCAATTATATTACAAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATATTACTTGATCGTTCAAATTCAGCAGTAATGACACGATATGTGAGCTCAAGAGACAACTTGAGGATTTTAATGAATCTTCTAAGAGAGTCAAGCAAGAGCATACAGATTGAAGCATTTCATGTTTTCAAGCTATTTGCTGCTAACCAACATAAACCAGCTGATATCGTCAGTATATTTGTTGCAAACAAAAGTAAGATGCTGAGACTATTGGAAGACTTCAAAATTGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTGATGAAGGAAATCGAAGCTCTTTAA 1008 0.3958 MKGLFKPKPRTPADVVRQTRDLLLLIDRNPEARESKREEKQMSELFKNIRELKQILYGNSESEPVAEACAQLTQEFFKGDTLRLFIKCLPKLNLEARKDATQVVANLQRQQVQSKLIASDYLEKNLDLMDVLIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPQMKNFFDYIQLPNFDVAADAAATFKELLTRHKSTVAEFLSKNYEWFFAEYNTKLLESSNYITRRQAVKLLGDILLDRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQHKPADIVSIFVANKSKMLRLLEDFKIDKEDEQFEADKAQVMKEIEAL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01264 335 Gene3D - 3 335 IPR011989 -
Spst6g01264 335 SUPERFAMILY ARM repeat 10 335 IPR016024 -
Spst6g01264 335 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 334 IPR013878 -
Spst6g01264 335 Coils Coil 35 55 - -
Spst6g01264 335 FunFam putative MO25-like protein At5g47540 3 335 - -
Spst6g01264 335 Pfam Mo25-like 4 335 IPR013878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01264 Spst-Chr6 11667441 11671418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01264 K08272 - gmx:100817060 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01264 6 11667441 11671418 Spst6g01264 6 11667441 11671418 ECH
Spst3g03281 3 82703913 82712563 Spst6g01264 6 11667441 11671418 PCT