Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03281 ATGAAAGTTGAGTGTGTTCTTGTGGTGTTTGTTGTCTTTGCTCTTGCAGTTGCTGAGACAGAGATAAAACCTAGTGTTTGGGAGCCCATTGAAGACATCAACGATCCTCATGTGACAGAGATAGCGAATTTCGCCGTGAAGAAATATGACGAGGAAAATGGTCAAAGCCTGAAGTTGGAGAAGGTGATAAAAGGTGACACTGAAGAAGTAAGATTGGCAACTTTTTATCGCCTCACTCTCAGCGCCACCAATGGCTCCTCTTCCAACAATTATGAAGCCGTTGTGGAGGGTAAATATCGAAAGAGACAAACGCTGAGTACAGAAAGTAGAAGAAAGAAACTGAGTCAGACGAGTGAACGAGACTGTGGAAAATCGAAATCGGATAGGGTAAGAGAAGAAGCGGAGATAGGAGTGTGCGCGTCGAAACCGAAGGGGCTTCGAAGGGGCTCTTCGTCGGAGGCGGTGGTGTATTCCCCTCCGGATTCCCCCACTATGAAGAGCCTCTTCAAGTCCAAGCCCCGCACTCCTTCCGACATCGTTCGCCAAACGCGAGATCTTCTCCGCCTCACCAACCGCGATGACGACAAGATGGCCGACCTCAGCAAAAACCTCCGGGAGATGAAGTCAATCCTCTATGGAAACAGCGAATCCGAACCGGTCCCCGAGGCTTGTGCGCAGCTGACTCAGGAATTCTTCAAGGAAAACACCTTGCGCCTCCTTATCCAATGTCTTCCCAAATTGAACTTGGAGGCCAGGAAGGATGCTACTCAAATTGTTGCGAATTTACAGAGGCAGCAGGTTCAGTCTAAGCTCATCGCGTCTGATTACTTGGAGACAAATATGGATCTCATGGATGTATTGATATCTGGCTATGAAAACATGGACATGGCTTTACACTACGGTGCGATGTTGAGAGAGTGCATAAGACATCAAATTGTTGCAAGATATGTTCTGAACTCATCTCATATGAAGAAGTTTTTTGACTACATTCAACTTCCAAATTTTGACATAGCTGCAGATGCCGCAGCTACTTTTAAGGAGCTATTGACGAGACATAAATCTACTGTAGCTGAATTCCTTTCCAAGAATTATGAATGGTTTTTTGCTGAATATAACTCTAAGCTGTTGGAATCTTCCAATTATATTACAAGGCGTCAAGCTGTCAAGTTGCTGGGAGATATGTTACTTGATCGCTCAAATTCAGCAGTAATGACACAATATGTCAGCTCACGAGACAACTTAAGGATTTTAATGAATCTTCTACGAGAGTCAAGCAAGAGCATACAGATAGAAGCATTTCATGTTTTCAAGCTGTTTGCTGCTAACCAAAAGAAACCTGCTGATATCATCAGCATACTTGTTGCAAACAGAAGCAAGCTTCTTAGACTTTTGGGTGACTTAAAAATCGATAAAGAGGATGAACAGTTTGAAGCTGACAAAGCTCAAGTTATTAGAGAAATAGCTGCTCTTGAACCTAGAGATCTTGCTTGA 1491 0.4386 MKVECVLVVFVVFALAVAETEIKPSVWEPIEDINDPHVTEIANFAVKKYDEENGQSLKLEKVIKGDTEEVRLATFYRLTLSATNGSSSNNYEAVVEGKYRKRQTLSTESRRKKLSQTSERDCGKSKSDRVREEAEIGVCASKPKGLRRGSSSEAVVYSPPDSPTMKSLFKSKPRTPSDIVRQTRDLLRLTNRDDDKMADLSKNLREMKSILYGNSESEPVPEACAQLTQEFFKENTLRLLIQCLPKLNLEARKDATQIVANLQRQQVQSKLIASDYLETNMDLMDVLISGYENMDMALHYGAMLRECIRHQIVARYVLNSSHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYEWFFAEYNSKLLESSNYITRRQAVKLLGDMLLDRSNSAVMTQYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQKKPADIISILVANRSKLLRLLGDLKIDKEDEQFEADKAQVIREIAALEPRDLA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03281 496 Pfam Mo25-like 168 490 IPR013878 -
Spst3g03281 496 Gene3D - 166 490 IPR011989 -
Spst3g03281 496 FunFam putative MO25-like protein At5g47540 167 490 - -
Spst3g03281 496 MobiDBLite consensus disorder prediction 150 176 - -
Spst3g03281 496 SUPERFAMILY ARM repeat 174 492 IPR016024 -
Spst3g03281 496 MobiDBLite consensus disorder prediction 105 134 - -
Spst3g03281 496 SUPERFAMILY Cystatin/monellin 24 100 IPR046350 -
Spst3g03281 496 Gene3D - 22 108 - -
Spst3g03281 496 Pfam Aspartic acid proteinase inhibitor 30 101 IPR000010 GO:0004869
Spst3g03281 496 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 165 491 IPR013878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03281 Spst-Chr3 82703913 82712563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03281 K08272 - gmx:100788031 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03281 3 82703913 82712563 Spst6g01264 6 11667441 11671418 PCT