Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00883 ATGTCCGGCGAAATGCACAACGATTCAGCCTCATCGTCAAGGGCTACCGCGGCGGCCTCTGATCAGCGCCAGCAGCAGCCGCCGCAGGCCCCTCTGAGCCGCTACGAATCACAGAAGCGGCGAGACTGGAACACCTTCGGACAGTACCTGAAGAACCAGACACCCCCAGTTTCGCTTTCCCAGTGCAACTTCAACCACGTGCTCGAGTTCCTTCGCTACCTGGACCAATTCGGAAAAACCAAGGTCCACCTCCACGGTTGCATCTTCTTCGGGCAGCCCGATCCTCCGGCGCCATGCACCTGTCCTCTCAGACAGGCTTGGGGGAGTCTCGATGCGCTCATCGGCCGGCTTCGGGCTGCCTACGAGGAGCACGGAGGCTCCCCGGAGACTAATCCCTTTGGAAGCGGAGCTATTCGCGTGTACCTTCGTGAGGTCAAGGAGTGTCAAGCGAAGGCAAGAGGGATCCCTTACACCAAGAAAAAGAAGAAGAAGAACCAACTTAAGGGCCCTCATCATGAGCCTCCAAAGTCCTTCAAGCAATTGGCCACTTGA 552 0.5779 MSGEMHNDSASSSRATAAASDQRQQQPPQAPLSRYESQKRRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKKNQLKGPHHEPPKSFKQLAT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00883 183 PANTHER PROTEIN G1-LIKE2 13 166 IPR040222 -
Spst6g00883 183 MobiDBLite consensus disorder prediction 1 33 - -
Spst6g00883 183 ProSiteProfiles ALOG domain profile. 34 161 IPR006936 -
Spst6g00883 183 MobiDBLite consensus disorder prediction 1 38 - -
Spst6g00883 183 MobiDBLite consensus disorder prediction 155 169 - -
Spst6g00883 183 MobiDBLite consensus disorder prediction 153 183 - -
Spst6g00883 183 Pfam ALOG domain 24 147 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00883 Spst-Chr6 8117571 8118122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00883 - - gmx:100306082 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00883 6 8117571 8118122 Spst6g00883 6 8117571 8118122 ECH
Spst5g00939 5 8783739 8788060 Spst6g00883 6 8117571 8118122 ECH