Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00939 ATGCATGAGATAGTGAAGGAGATTGGTGGAGAATTGAAATGTACAAGGTGGTGGAAGGACGACACATCAGTTGCCATTGCTTTCATGTCGTGGGTTCAGTGCCATTCGGTGGGCTCAGTTTCTAATTCTAACATTCTGGATGCATGTCATGGTTTACCAAAGCAGCCATCAGATTCAATGGTAAACATATGCTGTGATGAATCTTCTTCATGCATTAATTCATGGCTCGCAGTTACTTTGGTTCCATCTTGTGGTTTAATTCATGGAAATTGCAACCTTGTTAGTAGTGTTTCAACACTAGCCAAACAAGGCTCTCGATCTTCATCATTCAGCACCAGAATGTCTTCAAGTGGCAAGGATTTGGTAGAAGGATCAAGTTCTCCAACAGATTGCCAGCAGAGTCCAGGGACACTTAGCCGCTATGAGTCTCAAAAGAGAAGGGATTGGAACACTTTTGGGCAGTACTTGAAGAATCAGAGACCCCCAGTTCCACTGTCTCAGTGCAATTGCAACCATGTGTTGGATTTCCTTCGGTATCTGGACCAGTTTGGGAAGACCAAGGTTCACCTTCAAGGTTGCATGTTCTATGGGCAGCCAGAACCTCCAGCACCCTGCACATGCCCCCTTAGACAGGCTTGGGGAAGCCTTGATGCTCTCATAGGGAGGCTCAGGGCTGCTTATGAAGAAAATGGTGGCTCCCCAGAGACTAATCCTTTTGCAAGTGGCTCCATCCGTGTCTATCTCAAAGAGGTTAGGGACTGCCAAGCTAAGGCAAGAGGTATCCCTTACAAGAAGAAAAAGAAGGGCACAAATCAAACCAAGCCAAATGATGAATCAACCTCCACCATCCATTTCTCTTGA 861 0.4588 MHEIVKEIGGELKCTRWWKDDTSVAIAFMSWVQCHSVGSVSNSNILDACHGLPKQPSDSMVNICCDESSSCINSWLAVTLVPSCGLIHGNCNLVSSVSTLAKQGSRSSSFSTRMSSSGKDLVEGSSSPTDCQQSPGTLSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDFLRYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFASGSIRVYLKEVRDCQAKARGIPYKKKKKGTNQTKPNDESTSTIHFS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00939 286 ProSiteProfiles ALOG domain profile. 140 267 IPR006936 -
Spst5g00939 286 MobiDBLite consensus disorder prediction 261 286 - -
Spst5g00939 286 PANTHER PROTEIN G1-LIKE2 120 275 IPR040222 -
Spst5g00939 286 Pfam ALOG domain 132 253 IPR006936 -
Spst5g00939 286 MobiDBLite consensus disorder prediction 107 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00939 Spst-Chr5 8783739 8788060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00939 - - gmx:100802937 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00939 5 8783739 8788060 Spst6g00883 6 8117571 8118122 ECH
Spst5g00939 5 8783739 8788060 Spst5g00939 5 8783739 8788060 ECH