Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00772 ATGAGTGGTGGGTCATTGGGTATTCGTTCTGGGAGTTATGGCTCTTTGGAGAAGCAGCAGCTGCTGCTACAGCACAACGGCCTGTTGCCAATTCAATCAGCACGAAAGCCTCCCAAGACGCTGAAAGAGAAAGACAGGTTCTTCCATTGGATCTTCAAGTTTGCAGGCAGAAAGAAGGTGGGAATGCTCTTTCTCTTTATCATCTCCGCTGCTGTTTTCATCTGGGTTTTGTACCTTGGAAAAGGTGAAGATTCACATGACGGAAACGGTGTGCATAATAAGATTAGTGTTAATGAAAGTATGTCTATAGGTGATTCTCCATATGTAATCTCTACTTCAAATATCTTGGGCTTCTCTACAATTTCAATACAACCTCCGCCTTCCCCAAGCTATTTTCTGGGTTACACTCTTCCACCTGGTCATCCGTGTAATAGTTTCACACTTCCTCCTCCACCGGCAGACAAAAAGAGAACCGGGCCACGGCCCTGCCCGGTATGTTACCTTCCTGTGGAGGAAGCCATTGCACTTATGCCAAAGTTTCCGTCTCCTTCTCCAGTACTTAAGAACTTATCATTTATCTACGAGGAAACTCTTAGCAGGAATGGTGAATTTGGTGGTTCGGACTTTGGCGGATATCCTACTTTGAGGCAGAGAAATGAATCTTTTGATATACGAGAGTCAATGAGTGTGCACTGTGGATTTGTTAGAGGAACTAAACCTGGCCGCAACACAGGATTTGACATGGATGAAGCTGACCTCCTCAAAATGGAGCAGTGTCATGGCATAGTTGTTGCATCAGCCATATTTGGAAATTTTGATGAGATAAACGAGCCAACAAATATAAGTGATTATTCGAAGGAGACGGTATGCTTCCTTATGTTTGTAGATGAAGAAACAGAAAAGTATTTGAGGAGTTCTGGAAGGCTGGGAATCAGCAAGAAGATTGGTTTGTGGAGAATTATTGTTGCTCATAATCTTCCTTATACAGATGCAAGACGTACTGGGAAGATTCCAAAGCTTCTGTTGCATAGAATGGTTCCAAATGCTCGCTATTCTATATGGCTTGATGGAAAGCTTGAGCTTGTTGTTGATCCATATCAAATCCTTGAAAGGTTTTTGTGGAGGAAGAATGCAACTTTTGCAATATCTAAACATTATAGACGCTTCGATGTATTTGTTGAGGCCGAGGCAAATAAAGCCGCCAGAAAGTATGATAATGCCTCTATTGACTTTCAGATCGAGTTTTACAAGAATGAGGGACTGACTCCATATACAGAGGGCAAACTTCCTCTTATAAGTGATGTTCCTGAAGGATGTGTAATAGTAAGAGAGCATGTTCCCATTAGCAATCTTTTTACTTGTCTTTGGTTCAATGAAGTTGACCGGTTCACATCTAGAGACCAGATTAGTTTCTCAACTGTCAGGGATAAACTTTTGTCCAGGGTGGACTTTCATTTTGTCATGTTCTTGGATTGTGAAAGACGCAACTTCGTAGTTCAGAAATACCATAGGGATATATTGGAACGTCTGGTTGCTCCAGCAGTAGTTGCTCTCAGTCCTCCACCTCCTCCATTGCCTGTGTATGAAACATCACCGGAAAAGGTTGCAAGGAGGGGTCTTGGAAGGCGTGGAAGAGATAGGAGACAGGGTTCTAGACGCCACCGCAAAGTTGTGGGCGGAGGCAGGAACATACACACGGAAGCAAATTATACAGTTTTGACAGTGTGA 1728 0.4311 MSGGSLGIRSGSYGSLEKQQLLLQHNGLLPIQSARKPPKTLKEKDRFFHWIFKFAGRKKVGMLFLFIISAAVFIWVLYLGKGEDSHDGNGVHNKISVNESMSIGDSPYVISTSNILGFSTISIQPPPSPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEAIALMPKFPSPSPVLKNLSFIYEETLSRNGEFGGSDFGGYPTLRQRNESFDIRESMSVHCGFVRGTKPGRNTGFDMDEADLLKMEQCHGIVVASAIFGNFDEINEPTNISDYSKETVCFLMFVDEETEKYLRSSGRLGISKKIGLWRIIVAHNLPYTDARRTGKIPKLLLHRMVPNARYSIWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFVEAEANKAARKYDNASIDFQIEFYKNEGLTPYTEGKLPLISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKLLSRVDFHFVMFLDCERRNFVVQKYHRDILERLVAPAVVALSPPPPPLPVYETSPEKVARRGLGRRGRDRRQGSRRHRKVVGGGRNIHTEANYTVLTV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00772 575 PANTHER ALKALINE CERAMIDASE-RELATED 46 504 IPR006852 -
Spst6g00772 575 Pfam Protein of unknown function (DUF616) 190 503 IPR006852 -
Spst6g00772 575 MobiDBLite consensus disorder prediction 541 557 - -
Spst6g00772 575 MobiDBLite consensus disorder prediction 526 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00772 Spst-Chr6 6983418 6988746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00772 - - gmx:100792761 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00772 6 6983418 6988746 Spst6g00772 6 6983418 6988746 ECH
Spst3g00598 3 9595697 9601104 Spst6g00772 6 6983418 6988746 PCT