Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00598 ATGTCTGCTCCATTGGGTATTGGAATTCGTTCTGGAAGTTATGGGTCTCTGGATAAACAGGTACAGAACGGCTCTGCACGCAAGGCTTCAAAGATGCTCAAGGAGAAGGAGAAGGAGAGGTTGTTCCTTTGGATCTGCAAGTTCGCTGGCCGCAAGAAGGTCGGAATGCTCTTCCTCTGTCTCATCTCTGCTGCAGTTTTCATCTGGGTTTTGTATGTTGGAAAAGGTGAAGATTCTCAGGAAGCAAACAGAGTATCAAGCATTAGCGAGAATGAAAGCATGTCTACAAGTGATTCTACATCTCGGATCTCTACGACAAATGCAATGGACTTAACTACAAAATTGAGCCCTCCACCACCCCCTGCCTATTTTTTGGGCTACCATCTTCCTCCAGGGCATCCGTGTAATAGCTTCACACTTCCTCCCCCGCCTGCCGATAAAAAGCGTACTGGGCCACGTCCATGCCCGGTGTGTTACCTTCCTGTGGAAGAGGCCATTGGACTGATGCCAACTTTGTCCTCACCTTCACCGGTCCTTAGGAATTTAACATATGTCTACGAGGAAAATTTAAATAGAGATCGAGAATTTGGTGGTTCAGAATTTGGTGGATATCCTACTTTGAAGCAGAGAAATGATTCTTTTGATATACGAGAGTCAATGAGTGTGCACTGTGGATTTTTAAGAGGAACTAAACCTGGCCGCAACACAGGATTTGACATTGATGAAGCTGACCTTTTCGAAATGGAACAGTGTAATGGAGTGGTTGTTGCATCAGCCATATTTGGAAACTTTGACGAGATAAATGAGCCAAGAAATGTAAGTGACTATTCGAGGAAGACTGTGTGCTTCCTCATGTTCGTAGATGAAGAAACAGAAAAATATCTGAGCAGTTCTGGCAGGCTGGGAATCAGCAAGAAGATTGGTTCATGGAGGATTATTGTTGCTCGTAATCTGCCTTATGCAGATGCAAGACGGACAGGAAAGATTCCAAAGCTGTTGTTGCATAGATTAGTTCCAAATGCTCGCTATTCTATATGGCTTGATGGAAAGCTTGAGCTTGTTGTGGATCCATATCAAATTCTTGAAAGGTTTTTGTGGAGAAAGAATGCTACTTTTGCAATATCAAAGCATTATAGACGTTTTGATGTATTTGTTGAGGCTGAGGCAAATAAAGCTGCTGGAAAGTATGAAAATACCTCCATTGACTTTCAGATCGAGTTTTACAAGAAAGAGGGATTGACCCCATATACAGAGGCCAAGCTTCCTCTTATAAGTGATGTACCTGAAGGATGTGTGATAGTACGAGAACATGTTCCTATAAGTAACCTCTTTACTTGTCTTTGGTTCAATGAAGTTGACCGATTTACTTCAAGGGACCAGATTAGTTTCTCAACTGTAAGGGACAAAATTTTGTCCAGGGTAGATTTTCATTTTCACATGTTCTTGGATTGTGAAAGACGCAACTTTGTTGTTCAGAAATACCACAGGGATCTATTGCTGCGCCTGGCTCCACCAGCAACCTTTGGTTACAGTTCACCCCCGCCACCATCTCCTCCTCCGTTGCATGTGCTTGAAGCATCACCTGAAAAGGGACCAAACTTATCCGTTAGAAGAGGCCCTGGAAGGCGTGGAAAAGATCGAAGAACCGGTCAACGGCGCCACCGCAAAGTTGTAGCTGGAAGTAGAGAGATGGAACCATCCAAATTAGCAGTTTCGTTTGGGTGA 1725 0.4377 MSAPLGIGIRSGSYGSLDKQVQNGSARKASKMLKEKEKERLFLWICKFAGRKKVGMLFLCLISAAVFIWVLYVGKGEDSQEANRVSSISENESMSTSDSTSRISTTNAMDLTTKLSPPPPPAYFLGYHLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEAIGLMPTLSSPSPVLRNLTYVYEENLNRDREFGGSEFGGYPTLKQRNDSFDIRESMSVHCGFLRGTKPGRNTGFDIDEADLFEMEQCNGVVVASAIFGNFDEINEPRNVSDYSRKTVCFLMFVDEETEKYLSSSGRLGISKKIGSWRIIVARNLPYADARRTGKIPKLLLHRLVPNARYSIWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFVEAEANKAAGKYENTSIDFQIEFYKKEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKILSRVDFHFHMFLDCERRNFVVQKYHRDLLLRLAPPATFGYSSPPPPSPPPLHVLEASPEKGPNLSVRRGPGRRGKDRRTGQRRHRKVVAGSREMEPSKLAVSFG 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00598 574 MobiDBLite consensus disorder prediction 541 555 - -
Spst3g00598 574 MobiDBLite consensus disorder prediction 510 525 - -
Spst3g00598 574 MobiDBLite consensus disorder prediction 510 574 - -
Spst3g00598 574 Pfam Protein of unknown function (DUF616) 182 495 IPR006852 -
Spst3g00598 574 PANTHER ALKALINE CERAMIDASE-RELATED 34 496 IPR006852 -
Spst3g00598 574 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00598 Spst-Chr3 9595697 9601104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00598 - - gmx:100779951 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00598 3 9595697 9601104 Spst6g00772 6 6983418 6988746 PCT