Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00732 ATGTTTTCATTTAACTATCGCAAGGCTGATAGTGGGAGCCAATTCGTTCCTTTGCTCTATGCTCATCTGATAAACAATGGAATGATACCCTTTTTGGACACTATGAACATGAAACCTGGCCAGAAGCTGTTTGAGCATATTAACAACGCCATAAATAGCTGCAAGGTTGGTGTTGCTGTCCTCACAGATCGTTATTTCGATTCTTACTTCTGTCTTCACGAGCTTGCCCTCCTCAATGAGTCCAAGAAAAGAGTCGTCCCTATCTTTTATGACGTCAAGCCCTCGCAGCTTCAGGTTAAGAACAATGCACGTTATCCCCCTCAAGTACTCCAAAGGTTCTCCGAAGCTCTTGAGGAAACTAAATACACTGTAGGACTCACCTTTGATTCGTTAAATGGAGACTGGACGGAGCTGCAAAGAAAGATTTCGGATGCTGTGATAATGAACTTGTTTGAAGTAGAGGAGGAGGAGGAGAGGAGGAGGAGAACGGCATGCAACATTCAACCGTGA 510 0.4412 MFSFNYRKADSGSQFVPLLYAHLINNGMIPFLDTMNMKPGQKLFEHINNAINSCKVGVAVLTDRYFDSYFCLHELALLNESKKRVVPIFYDVKPSQLQVKNNARYPPQVLQRFSEALEETKYTVGLTFDSLNGDWTELQRKISDAVIMNLFEVEEEEERRRRTACNIQP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00732 169 ProSiteProfiles TIR domain profile. 1 121 IPR000157 GO:0007165
Spst6g00732 169 Pfam TIR domain 6 95 IPR000157 GO:0007165
Spst6g00732 169 PANTHER TMV RESISTANCE PROTEIN N-LIKE 5 136 - -
Spst6g00732 169 Gene3D - 3 152 IPR035897 -
Spst6g00732 169 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 123 IPR035897 -
Spst6g00732 169 SMART till_3 4 145 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00732 Spst-Chr6 6641904 6642517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00732 5 102 Miscellaneous Gene Families AT5G44920 33.333 2.08e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00732 - - ccaj:109803865 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00732 6 6641904 6642517 Spst6g00732 6 6641904 6642517 ECH
Spst3g00553 3 9046703 9047390 Spst6g00732 6 6641904 6642517 PCT